Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01110 ATGGACAGTGATAATGATTTCACTTTTTGTCAGGTCAGTACACCTCCGAATGAAACAAATGAGCTTGTTTCAGAAATTGCTGATATTTCCATAAAAGAAGAATCCTCAAATGCTAGTAGTAGTAAAAACAATAATGGTGGTTTCTTATGGAAGGATGGTTTGCCGAATGATTCTTCCAGCTCTAAAAAGGAGGGTACAGTTGGTTCTTTGTCTTTCAGTGTAATTAGCACATCGACTGAATCAACCCAAAGTGATGCTAAGAATTTGCCTCAGAAGTTGCCAGAACAGAAGAGTTCTGTTAAAAAGCCAACAGTTCGGGCCAAAGTTCCTTTTGAAAAGGGTTATAGTCAAATGGACTGGCTCAAGCTTACACGAACTCATCCTGACCTTGCAGGTCTAAAAGGACAGTCAAACAGGAGACTTATTTCTATGGATGAAGTTAGAAAACACAAATTAGAAGGCGAAATGTGGACTGTATTAAAAGGCCGCGTTTACAATGTATCACCTTATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGACAGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAAAAATGCCTTGTGGGTACTTTGGATGAAAGTCATTGA 657 0.3836 MDSDNDFTFCQVSTPPNETNELVSEIADISIKEESSNASSSKNNNGGFLWKDGLPNDSSSSKKEGTVGSLSFSVISTSTESTQSDAKNLPQKLPEQKSSVKKPTVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNRRLISMDEVRKHKLEGEMWTVLKGRVYNVSPYMKFHPGGVDMLMKTVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDESH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01110 218 PRINTS Cytochrome B5 signature 174 188 IPR001199 -
Trre8g01110 218 PRINTS Cytochrome B5 signature 202 214 IPR001199 -
Trre8g01110 218 PRINTS Cytochrome B5 signature 164 174 IPR001199 -
Trre8g01110 218 MobiDBLite consensus disorder prediction 1 47 - -
Trre8g01110 218 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 170 177 IPR018506 GO:0020037
Trre8g01110 218 MobiDBLite consensus disorder prediction 79 104 - -
Trre8g01110 218 MobiDBLite consensus disorder prediction 1 66 - -
Trre8g01110 218 FunFam Cytochrome b5 reductase 4 137 218 - -
Trre8g01110 218 Gene3D - 136 218 IPR036400 -
Trre8g01110 218 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 139 217 IPR036400 -
Trre8g01110 218 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 139 215 IPR001199 -
Trre8g01110 218 MobiDBLite consensus disorder prediction 79 98 - -
Trre8g01110 218 SMART Cyt_b5_2 142 215 IPR001199 -
Trre8g01110 218 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 1 217 - -
Trre8g01110 218 Pfam Cytochrome b5-like Heme/Steroid binding domain 144 214 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01110 Trre-Chr8 8051458 8056669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01110 140 217 NADPH P450 reductases AT1G26340 43.590 4.94e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01110 - - ccaj:109814642 312.768