Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01092 ATGAGATATGCATTGAGTTTATCTTTTACCATGACAAAGGTAGAATACTTATGCATTGAGTGTGGCAATTCTTTTCCATCTCATTCGACTTTAGCAGTCCATACTATTGAACAACATCATCCAAATCGAATATTAGAAAATGCACCACCACCACCAAAAAATGCACCACCACCATCAACACAACCAAAAAATGCACCATCAACACAACCAAAAAATGCACCACCGCCACCACCACCTACACCAAAAAATGTACCACCACCACAAGAAAATGCACCACCTCCACATGTGCTGCCACTTGACTTGAACCAGCCTGCTTATGCTCTAGATTTCGACCTTAATATCCCTTTTATGTCAAATGAATGA 363 0.4022 MRYALSLSFTMTKVEYLCIECGNSFPSHSTLAVHTIEQHHPNRILENAPPPPKNAPPPSTQPKNAPSTQPKNAPPPPPPTPKNVPPPQENAPPPHVLPLDLNQPAYALDFDLNIPFMSNE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01092 120 ProSiteProfiles Zinc finger C2H2 type domain profile. 16 44 IPR013087 -
Trre8g01092 120 MobiDBLite consensus disorder prediction 36 102 - -
Trre8g01092 120 MobiDBLite consensus disorder prediction 45 99 - -
Trre8g01092 120 ProSitePatterns Zinc finger C2H2 type domain signature. 18 40 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01092 Trre-Chr8 7929802 7930164 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre8g01092 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01092 - K09228 ifu:128610696 40.0466