Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01088 ATGGCAATAGCATTAACACAATGCTCAGAAAAGCTAGGATTCCTCATATTTCTGTTAGGCAAAAACTTCGTCATGTTTATGGCGATGGTGATTGCATGCAATGGTTTACATTTTCTACTAAAGCCTTATCAACAACCCCGCATTACTTCCGACATAATTGTTGGACTAGTTGTGGGAAATGCGCCATTTTTACGCAATCTATATCGACAATTCAACCATACATTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGAGTAGAAATGGATCCTTATGTACTCTTCAAAAGACCAAGTAGAGATGTTCAAGTTGCATATGGAGGAATAATCATAACATTCATCCTAGCATTAGCCATAACACCTCTTCTCCATTACTTCACAGGCGAAGAGCATCTACTAGAATTCACTCTCGCCCTCTCGATTCTTCTCTCAAGTACGGCATCGCCTGTCCTAACCCGTCTCATAACAAGTCTCAACATAGGAAAGTCGGATATCGGGAAACTTGTCATAGCAGCAGGGATGTATTCGGATTTTCTAAGCTCTTTGCTTCTTTCAGTCGGCTACATTTCAATGCCGTTGGACACATTTTGCCACAATGTCGAAAAAGAAGGACGTCTTAAAAGGGCTATTGTAATGAATAGCGCTGTTCTTGGCCAAGCATTGTTCACGGCAATGGTTTCGCCGATTTTCATGAGATGGGTTAACAACGAAAATCCAGAAGGAAAACCTATGAAAGGCTCACATTTAGTACTATCAATAGCATTCATGGTTATGAGTTGTGCTTCATCAATTCTATATAATTATAGTCCAATTCTAAGTGCATTTATAACAGGAATTTGTTTTCCTAGGGAAGGAAGAGTTTCAAAATGGGTTATTAGCAAAATCAATTACTTGTTAACAACTATATTTTTTCCAATATTTTTCTTGTGGATGGGTTATGCAGCTGATTTTAGGCAGTTTCAGCCTCAACAATTAGGAACATGGGGAAGATTATTTATACCTGTCTTAATTGTAATGGGAGGTAAAGTTGTTGGAACAGTTGTTTGTGGTGCAATTCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGCTACTAGCTACCAAGGGACATTTTCATATCTACATGGCTATCAAAATGGGTTGTGGCTCCAATACTTCGGCCGGCATTGCATTGATAATTGCAATATTTTTTACAGTGGTGCATTCCCCATCCGTCGTAGCACATATCATCAAACGAGCCAAGAGAAAAGTACCTACTCATCGCATGTCCCTCCAATTGCTTGATCCATCAAGTGAACTAAGGATTCTGCTATGCCTTCATGGACCTGACAACATTTCAGCATCCATCAACTTCATGGAGATCTCAAGAGGAAAATCAGATCCCGGCATTCTTGTTTACGTCTCGGAAATGATTGAACTAACCAATCAAATAGCAGTCACAGTAGAAAGAGGTGAAGGAATAGAAACAACAAATGTAAAAGACAAGGATGTCATGGAGATGAGAGACACAATAACTAGCTCATTTCAAGCTTATATAGACGATGATGGTGATGGTGTTACGCTCAAAAGAACAATGGCGGTGTCGACAATTAATAACATGGCCCAGGACATTTGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCATTCTACCATTCCATAGGAGGCAATGTGTGGATGGGAAATTGGATGGTGGCAATCAAGGATTCAGATATGTGAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGATCCATTGAAAAGATATCAAAGACTCATGTATCACTCAATGTTGCAACACTGTTCATTGGTGGAAAAGACGATAGAGAAGCACTTGCCTACGCCGGTCGCGTAGCAGGGCATCCGGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTGCGGCATATAGGGTAAGCCTGCCAGATAAAGGCGAAGAGATGGGGCTAGACGATGAATGTTTTGCACATTTCTATGATAAACATATTTCTGGAGGTCGAATTTCATATATGGAGAAGCATCTTGCAAATGCAGCCGAGACTTTCTCTACTCTTAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAGAGAAGGTGGACTAAACTCGATATTGACGAAGGGAATGAATGATTGGCAACAATGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCAGATTTCTCAAAAACAGTGTCAGTGTTGGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGGCTTGATGAAGAATTCAATATCATGTAG 2358 0.4008 MAIALTQCSEKLGFLIFLLGKNFVMFMAMVIACNGLHFLLKPYQQPRITSDIIVGLVVGNAPFLRNLYRQFNHTFGFIIDFGMMCYMFALGVEMDPYVLFKRPSRDVQVAYGGIIITFILALAITPLLHYFTGEEHLLEFTLALSILLSSTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFLSSLLLSVGYISMPLDTFCHNVEKEGRLKRAIVMNSAVLGQALFTAMVSPIFMRWVNNENPEGKPMKGSHLVLSIAFMVMSCASSILYNYSPILSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGYAADFRQFQPQQLGTWGRLFIPVLIVMGGKVVGTVVCGAILGFHWPESVAIGLLLATKGHFHIYMAIKMGCGSNTSAGIALIIAIFFTVVHSPSVVAHIIKRAKRKVPTHRMSLQLLDPSSELRILLCLHGPDNISASINFMEISRGKSDPGILVYVSEMIELTNQIAVTVERGEGIETTNVKDKDVMEMRDTITSSFQAYIDDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIILPFHRRQCVDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSIEKISKTHVSLNVATLFIGGKDDREALAYAGRVAGHPGVKLTVIRFLVDTSVESSRIAAYRVSLPDKGEEMGLDDECFAHFYDKHISGGRISYMEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01088 785 PANTHER CATION/H + ANTIPORTER 27 771 - -
Trre8g01088 785 FunFam Cation/H(+) antiporter 28 20 426 - -
Trre8g01088 785 Pfam Sodium/hydrogen exchanger family 28 414 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre8g01088 785 Gene3D - 21 426 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01088 Trre-Chr8 7890229 7893861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01088 24 785 Antiporter Super Family AT3G52080 49.807 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01088 K26731 - gmx:100815945 1167.53