Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01075 ATGTCCAACCATAATCATAATCATACATTTTCAATTTCATCTAGCTTGTTGATATTTTTGTTACTAAATCTATGTCAAATCACTACAAGCCTAACACAATTTGAAGCGTTGCTAAAATGGAAACAAAGTCTCCCACCACAACCAATTCTTGATTCATGGATCATTAACAACTCAAGTTCAACACAAACACCATGTTCATGGAGAGGTATAACTTGTGATTCAAAAGGAAGTGTTACAATCATAAACTTAGCTTATACTGGACTTGAAGGTACTCTTAATCACTTAAACTTATCAGTTTTTCCAAACCTTCTTCGTCTCGATCTTAAAACAAATAATCTCACCGGTGTTATACCTGAAAACATCGGCGTTCTTTCGAAACTCCAATTTCTTGATCTTTCTACTAATTATCTCAATGGAACTTTGCCTCTTTCTATAGCCAATTTGACTCAAGTTTACGAGCTTGATGTATCAAGAAACGATGTTTCGGGTATATTAGACCCTCGTTTGTTTCCTGATGGGACTAATAAGCCCAGTTCCAGAACTGGGCTTATAGGCATCAGGAATCTTCTTTTCCAAGATACCCTTTTGGGCGGTCCACTTCCGATCGAAATTGGGAATATAAAAAACTTGACTTTACTAGCACTTGATGGAAATAATTTCTCTGGGCCAATTCCTTCATCTTTAGGGAACTGTAAACATTTAAGCATTCTTAGATTAAATGAAAATCAATTCTCTGGTCCAATTCCACCTAGTATTGGCAAATTAACCAACTTAACTGATCTTAGATTTTTCACCAACAACTTAAATGGTACTGTGCCACATGAATTTGGAAACCTTTCATCTTTGATTGTGTTACATCTTGCTGAGAACAATTTCATTGGTGAGTTACCACCAGAAATTTGCAAAAGTGGAAAACTTGTTAATTTCAGTGCTGCTTATAACAGTTTCACTGGTCCAATTCCAAGAAGTCTTAGAAACTGCCCTTCTTTGTATAGAGTTAGAATGGAATACAATGAGTTAACCGGTTATGCAGATCAAGATTTCGGAGTTTATCCGAATCTTACTTACATTGATTTCAGCGATAATAGTGTTGAAGGTAGTTTATCTTCTAAATGGGGTTCATGCAAAAACTTGCAATCACTCAAAATGGCGGGTAATTCGGTTAGTGGAAAAATTCCAAGTGAGATTTTTCATTTGGATCAATTACAAGAGCTTGATCTATCATTTAACCGATTATCGGGAACTATTCCTTCACAAATTGGAAATTCTTCGAATTTGTCTAACTTAAATTTGAATGGAAATAGTCTTTCTGGTAAGATACCTGTTGAAATCGGAAAGCTTTCGAATTTACAAACTTTAGACCTTTCGATGAACTCGTTGTTTGGAGAAATTCCAGCTCAGATAGGTGATTGTTCGAATTTGTTGAATTTGAATTTGAGTAACAATCATTTGAATGGAACCATTCCTTTCCAAATTGGAAATCTTGGTTCATTACAAGACTTTTTGGATTTGAGTTACAATTCAATTTCTGGTTCAATTCCTGGTAATATCGGTAAGCTTTCGAGTTTGATAAGCTTAAATATCTCGAACAATAATTTATCGGGTAAAATTCCCGATCAAATTAGTGGAATGTTGAGTTTGTCAAGTCTTAATCTCTCTAACAATCATTTGGAGGGTAATGTTCCTAAAGATGGCATTTTCAAATTGAACTCTTCTAATTTACTTGATTTGAGCAATAATCAAGGGCTATGTGGTAATTTCAAAGGTTTGAAACCTTGCAATGTTTCACTCATTCAACCAAATGATGATGGAAGTAACAAAAAAAAAGTTGTGATTCCAATTGTTGCTTCTTTAGGAGGTGCACTTTTTCTCTCATTGATAATTGTTGGCATAATTTTGTTATTCTACAAGAGAAAATCAAGCACTACAAGAACAAGGTCTTTATTGGATACACCAAATCCATTTTCAATTTGGTATTTCAACGGAAGAGTTGTGTACGGTGACATAATCGAAGCTACTAACAATTTCAATGACAAGTTTTGCATAGGCGAAGGAGCGTTCGGGAATGTTTACAAAGCCGAATTGAAAGGTGGTCAAATATTCGCGGTGAAAAAGTTGAAATGTGATGAAGAAAATTTAGACAAAGAAAGTATAAAAACATTTGAAAGTGAAGTAGAAGCTATGACTGAAACAAGACATAGAAACATTGTGAAGCTTTATGGATTTTGTTGTGAAGGGATGCATACATTTCTTGTTTATGAATATATGGATAGAGGAAGTTTAGCTGATATGTTGAATGATGATAAAAAAGCTTTAGAACTTGATTGGTTTAAAAGAGTTGAGATTGTTAAAGGTGTTGCAAGTGCTCTTTCTTATATGCATCATGATTGTTCACCAATTTTGATTCATAGAGATATATCAAGTAAAAATATTTTGTTATCAAGAGATCTTGAAGCTCATGTTTCAGATTTTGGTACTGCAAGGTTTCTTAAGCCAAATTCACCTATTTGGACTTCATTTGCTGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACAGAGAAATGTGATGTATTCAGCTTTGGTGTTTTAGCATTTGAAATTCTAACAGGAAAACACCCTGGTGATCTTGTTTCTTACATACAAACATCTAATGATCAAAAGATAGATTTCAAAGAGATTTTAGACCCGCGCCTTCCTTCGCCTCCAAAGAACATTTTGAAGGAATTGGCATTGGTTGCAAATTTAGCTCTTTCTTGTTTACACACAAATCCTCAATCTAGACCAACCATGAGAAGCATTGCCCAGTTGCTAGAAATGGAGACTGCATTTAACACTTGA 2856 0.3477 MSNHNHNHTFSISSSLLIFLLLNLCQITTSLTQFEALLKWKQSLPPQPILDSWIINNSSSTQTPCSWRGITCDSKGSVTIINLAYTGLEGTLNHLNLSVFPNLLRLDLKTNNLTGVIPENIGVLSKLQFLDLSTNYLNGTLPLSIANLTQVYELDVSRNDVSGILDPRLFPDGTNKPSSRTGLIGIRNLLFQDTLLGGPLPIEIGNIKNLTLLALDGNNFSGPIPSSLGNCKHLSILRLNENQFSGPIPPSIGKLTNLTDLRFFTNNLNGTVPHEFGNLSSLIVLHLAENNFIGELPPEICKSGKLVNFSAAYNSFTGPIPRSLRNCPSLYRVRMEYNELTGYADQDFGVYPNLTYIDFSDNSVEGSLSSKWGSCKNLQSLKMAGNSVSGKIPSEIFHLDQLQELDLSFNRLSGTIPSQIGNSSNLSNLNLNGNSLSGKIPVEIGKLSNLQTLDLSMNSLFGEIPAQIGDCSNLLNLNLSNNHLNGTIPFQIGNLGSLQDFLDLSYNSISGSIPGNIGKLSSLISLNISNNNLSGKIPDQISGMLSLSSLNLSNNHLEGNVPKDGIFKLNSSNLLDLSNNQGLCGNFKGLKPCNVSLIQPNDDGSNKKKVVIPIVASLGGALFLSLIIVGIILLFYKRKSSTTRTRSLLDTPNPFSIWYFNGRVVYGDIIEATNNFNDKFCIGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDKESIKTFESEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDRGSLADMLNDDKKALELDWFKRVEIVKGVASALSYMHHDCSPILIHRDISSKNILLSRDLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDQKIDFKEILDPRLPSPPKNILKELALVANLALSCLHTNPQSRPTMRSIAQLLEMETAFNT 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01075 951 Gene3D Phosphorylase Kinase; domain 1 642 755 - -
Trre8g01075 951 FunFam Nuclear pore complex protein NUP107 30 171 - -
Trre8g01075 951 Gene3D Transferase(Phosphotransferase) domain 1 756 950 - -
Trre8g01075 951 SUPERFAMILY RNI-like 248 584 - -
Trre8g01075 951 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Trre8g01075 951 ProSitePatterns Tyrosine protein kinases specific active-site signature. 801 813 IPR008266 GO:0004672|GO:0006468
Trre8g01075 951 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 177 271 - -
Trre8g01075 951 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Trre8g01075 951 SUPERFAMILY Protein kinase-like (PK-like) 650 945 IPR011009 -
Trre8g01075 951 Gene3D Ribonuclease Inhibitor 342 596 IPR032675 -
Trre8g01075 951 ProSiteProfiles Protein kinase domain profile. 676 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01075 951 Gene3D Ribonuclease Inhibitor 174 252 IPR032675 -
Trre8g01075 951 Pfam Leucine rich repeat 502 557 IPR001611 GO:0005515
Trre8g01075 951 Pfam Leucine rich repeat 401 460 IPR001611 GO:0005515
Trre8g01075 951 SUPERFAMILY L domain-like 60 262 - -
Trre8g01075 951 PANTHER LEUCINE RICH REPEAT KINASE 2 184 947 - -
Trre8g01075 951 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Trre8g01075 951 SMART LRR_typ_2 447 471 IPR003591 -
Trre8g01075 951 SMART LRR_typ_2 124 148 IPR003591 -
Trre8g01075 951 SMART LRR_typ_2 544 569 IPR003591 -
Trre8g01075 951 SMART LRR_typ_2 399 423 IPR003591 -
Trre8g01075 951 SMART LRR_typ_2 279 303 IPR003591 -
Trre8g01075 951 SMART LRR_typ_2 520 543 IPR003591 -
Trre8g01075 951 FunFam Leucine-rich repeat receptor protein kinase MSP1 638 755 - -
Trre8g01075 951 FunFam Leucine-rich repeat receptor-like protein kinase TDR 276 595 - -
Trre8g01075 951 PRINTS Leucine-rich repeat signature 402 415 - -
Trre8g01075 951 PRINTS Leucine-rich repeat signature 447 460 - -
Trre8g01075 951 FunFam MDIS1-interacting receptor like kinase 2 756 949 - -
Trre8g01075 951 Pfam Protein kinase domain 681 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01075 951 Gene3D Ribonuclease Inhibitor 253 341 IPR032675 -
Trre8g01075 951 SMART serkin_6 676 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01075 Trre-Chr8 7760493 7763869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01075 16 849 Receptor kinase-like Gene Family AT4G08850 39.892 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre8g01075 Pkinase 5.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01075 - - aprc:113866080 1425.61