Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01061 ATGAAACCTTTTCTTTTCTTTCTCATCACATTCTCCTTCCTTTGTCAAACACAGTTACCACTAGTTTCCTCTGTCACAACAACTCTACCCTTTCAACTCATCACTCTCCTCTCAATAAAATCCTACATCATTGACCCTCTCAATCACCTCAATGACTGGAAAATCAACCCTTCTAATTCTTCCCCTACTTTCTCAAACTCCAATAACCACCAAGACCCAATTTGGTGTTCTTGGAGAGGCATCACTTGTCACCCAAAAACAACACAAATCACTTCCCTAAACCTCTCTAACCTCAACCTTTCAGGCACAATTTCACCTCAAATTCGCTACCTAACCACCTTAACCCACTTGAACATAAGCGGAAATGACTTCAATGGAACTTTCCAAACAGGAATATTCCAACTCATTGGGCTTAGAACATTAGACATCAGCCATAATTCCTTCAGCTCAATTTTCCCACCTGGAATTGCAAAGCTAAGATTCTTAAGAATCTTCAATGCTTACAACAACAACTTCACAGGTCCTCTCCCTGAAGAACTAATCAAACTTCCATTTCTAGAGCAGCTCAACCTTGGGGGAAGCTACTTCAGTGGGAGAATCCCACCAAGTTATGGCACTTTTAAAAGACTCAAATTCCTACAATTATCTGGTAATGCATTGGAAGGTTCACTACCTCCTCAATTAGGCCTATTATCAGAGCTACAACACTTGGAAATTGGATACAACACATTTTCTGGGACAATACCAATTGAATTAACATTGTTGTCTAATCTCACTTACTTAGACATCTCAGCAGCCAACATTTCAGGTCAAGTGATTCCTGAGCTAGGAAACTTAACGATGCTTGAAACATTGCTTCTTTTCAGGAATCCCTTAAGTGGCAAAATTCCATCAAGCATAGGAAAGTTGAAATCCCTAAAAGCTATTGATTTATCAGAAAATGAACTCACAGGCTCAATTCCACCCGAAATAGCAATGTTGAAGGAACTAGAAGAATTGAGGCTCATGTATAACAAATTGAATGGTGAAATTCCACAAGGAATTGGTGAGCTTCCAAAACTCAACATTTTCTATGTTTTCAACAACTCACTCAGTGGTACACTACCACCAAAACTCGGCTCCAACGGTTTACTCCAGCGACTCGATGTTTCCACAAACTCACTTCAAGGTTCAATCCCTGTTAACATTTGTAAAGGAAACAATCTTGTTAGGTTCAATCTTTTCAACAACAAATTCACCAATAATCTTCCATTATCACTCACAAACTGCACCTCACTAGCCAGAGTTCGTATCCAAAACAACAACCTCAATGGGACAATTCCACAAACACTTACCATGCTTCCTAATTTAACCTACCTTGATTTAAGCAACAACAATTTCAACGGTGAAATTCCTCAGGAATTTGGAAACCTTCAATATTTAAACATCTCTGGAAACTCTTTTGAAAGCAAATTACCAAACAACATTTGGAATTCGAGTAATCTACAGATTTTCTCAGCTTCATTTTCGAAAATCACCGGTCAAATTCCCGATTTTACCGGTTGCAAAACGATTTACACAATCGAATTGCAAGGGAATTTCATCAACGGTAACATTCCTTGGAATATCCGTGATTGCGAAAAACTGATTCTGTTAAATCTAAGTAGAAACAATCTCACCGGAATCATACCTTGGGAAATTTCAATTCTACCTTCAATCACCGACGTTGATCTCTCACAAAACTCACTCACCGGAATCATTCCTTCAAGCTTCAACAACTGTTCCACTCTCACGAATTTCAATGTCAGTTTCAATTCCTTAACCGGACCAATTCCTTCCTCCGGCGTCTTCGAGAGCCTTCATCCATCTTCTTACTCCGGCAACGAAAACCTCTGCGGTCATCTTTTAGCCAAACCCTGCGCCGCCGCCGCCGGAGAAAACGAACTTGAAGCTCACCGTCAACAGCCAAAGAAAACCGCCGGCGCAATCGTTTGGATAATCGCGGCGGCGTTCGGAATCGGTCTCTTCGTTCTCGTCGCCGGTACACGTTGCTTTCATGCAAACTATAACCGTCGATTTAACGGTAACGAAACTAACGGCGAAATCGGACCCTGGAAGTTAACGGCGTTTCAACGGTTAAACTTCACGGCGGATGATGTTCTCGAGTGTGTGTCAAGGTCGGATAAGATATTAGGAATGGGGTCCACTGGAACAGTTTATAAAGCAGAAATGCCAGGTGGCGAAATCATAGCCGTTAAAAAACTGTGGTGTAAACAAAAGGAAAGTAATATAATCCGACGGAGGAGAGGAGTTTTAGCAGAAGTTGATGTATTAGGAAATGTGAGACACAGGAACATAGTGAGATTGTTAGGGTGTTGTAGTAACAAGGAATGTACAATGTTGCTCTATGAGTATATGGTCAATGGTAACCTTGATGATTTGTTGCATGCAAAGAATAAAGGGGGTAATATGGTAATTTGTGATTGGTATACTAGGTATAAGATAGCATTGGGTGTGGCACATGGAATTTGTTATCTTCATCATGATTGTGATCCTGTGGTTGTGCATAGAGATCTTAAACCTAGTAATATTTTATTGGACGGTGAGATGGAAGCTAGAGTTGCTGATTTTGGTGTTGCTAAGTTGATTCAAACTGATGAATCTATGTCTGTTATTGCTGGATCTTATGGTTACATTGCTCCAGAATATGCTTACACACTCCAAGTTGATGAAAAGAGTGACATTTACAGCTACGGAGTGGTGTTAATGGAAATTTTAAGTGGAAAACGTTCGGTGGATCAAGAATTTGGTGATGGAAACAGCATTGTCGATTGGGTTAGGTCTAAAATAAAAACAAAAGATGGAATTGAAGGTATATTGGACAAGAATGCAGAAGCAGGGTGTAGCAAAGTAAGAGAAGAAATGATACAAATACTTAGAATTGCATTGCTTTGCACAAGTAGAAATCCAGCTGATAGACCTTCAATGAGAGATGTTGTGTTGATGCTTCAAGAGGCAAAACCTAAGAGAAAATTGTTTGATAGTGTTGTTTTAGGTCGATGTGCTAATGACAATGTTGATGTTGGTGATGATGGTGGTGATATTCCATTGGCTCAAAAGCCAATTATCAATTAA 3114 0.3985 MKPFLFFLITFSFLCQTQLPLVSSVTTTLPFQLITLLSIKSYIIDPLNHLNDWKINPSNSSPTFSNSNNHQDPIWCSWRGITCHPKTTQITSLNLSNLNLSGTISPQIRYLTTLTHLNISGNDFNGTFQTGIFQLIGLRTLDISHNSFSSIFPPGIAKLRFLRIFNAYNNNFTGPLPEELIKLPFLEQLNLGGSYFSGRIPPSYGTFKRLKFLQLSGNALEGSLPPQLGLLSELQHLEIGYNTFSGTIPIELTLLSNLTYLDISAANISGQVIPELGNLTMLETLLLFRNPLSGKIPSSIGKLKSLKAIDLSENELTGSIPPEIAMLKELEELRLMYNKLNGEIPQGIGELPKLNIFYVFNNSLSGTLPPKLGSNGLLQRLDVSTNSLQGSIPVNICKGNNLVRFNLFNNKFTNNLPLSLTNCTSLARVRIQNNNLNGTIPQTLTMLPNLTYLDLSNNNFNGEIPQEFGNLQYLNISGNSFESKLPNNIWNSSNLQIFSASFSKITGQIPDFTGCKTIYTIELQGNFINGNIPWNIRDCEKLILLNLSRNNLTGIIPWEISILPSITDVDLSQNSLTGIIPSSFNNCSTLTNFNVSFNSLTGPIPSSGVFESLHPSSYSGNENLCGHLLAKPCAAAAGENELEAHRQQPKKTAGAIVWIIAAAFGIGLFVLVAGTRCFHANYNRRFNGNETNGEIGPWKLTAFQRLNFTADDVLECVSRSDKILGMGSTGTVYKAEMPGGEIIAVKKLWCKQKESNIIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNKECTMLLYEYMVNGNLDDLLHAKNKGGNMVICDWYTRYKIALGVAHGICYLHHDCDPVVVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDQEFGDGNSIVDWVRSKIKTKDGIEGILDKNAEAGCSKVREEMIQILRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLFDSVVLGRCANDNVDVGDDGGDIPLAQKPIIN 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01061 1037 Pfam Leucine rich repeat 425 480 IPR001611 GO:0005515
Trre8g01061 1037 FunFam Leucine-rich repeat receptor-like protein kinase TDR 327 635 - -
Trre8g01061 1037 SUPERFAMILY RNI-like 92 437 - -
Trre8g01061 1037 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Trre8g01061 1037 SMART LRR_typ_2 207 231 IPR003591 -
Trre8g01061 1037 SMART LRR_typ_2 563 586 IPR003591 -
Trre8g01061 1037 SMART LRR_typ_2 279 303 IPR003591 -
Trre8g01061 1037 SMART LRR_typ_2 327 351 IPR003591 -
Trre8g01061 1037 SMART LRR_typ_2 135 159 IPR003591 -
Trre8g01061 1037 SMART LRR_typ_2 447 470 IPR003591 -
Trre8g01061 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Trre8g01061 1037 SUPERFAMILY L domain-like 378 626 - -
Trre8g01061 1037 Gene3D Ribonuclease Inhibitor 201 293 IPR032675 -
Trre8g01061 1037 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 687 798 - -
Trre8g01061 1037 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 353 1000 - -
Trre8g01061 1037 Gene3D Ribonuclease Inhibitor 470 515 IPR032675 -
Trre8g01061 1037 Gene3D Ribonuclease Inhibitor 397 469 IPR032675 -
Trre8g01061 1037 Gene3D Ribonuclease Inhibitor 516 630 IPR032675 -
Trre8g01061 1037 Gene3D Phosphorylase Kinase; domain 1 694 798 - -
Trre8g01061 1037 Gene3D Ribonuclease Inhibitor 33 200 IPR032675 -
Trre8g01061 1037 Gene3D Transferase(Phosphotransferase) domain 1 799 1011 - -
Trre8g01061 1037 FunFam Nuclear pore complex protein NUP107 44 200 - -
Trre8g01061 1037 Gene3D Ribonuclease Inhibitor 294 396 IPR032675 -
Trre8g01061 1037 SUPERFAMILY Protein kinase-like (PK-like) 721 996 IPR011009 -
Trre8g01061 1037 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524
Trre8g01061 1037 SMART serkin_6 718 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01061 1037 FunFam Leucine-rich repeat receptor protein kinase EMS1 201 298 - -
Trre8g01061 1037 ProSiteProfiles Protein kinase domain profile. 718 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01061 1037 FunFam leucine-rich repeat receptor-like protein kinase TDR 799 1008 - -
Trre8g01061 1037 Pfam Protein kinase domain 721 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01061 Trre-Chr8 7616719 7621167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01061 3 1004 Receptor kinase-like Gene Family AT1G08590 42.427 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre8g01061 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01061 - - gmx:100813189 1592.02