Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01035 ATGGAGGCCTTTTCTTCAAAGATACTTCTAATCAATTTTGCCTTTACTTTCATCACATATTCTATCCAAGCAAATGAAGGACCATACCAACAATCCAACACATTATTCATTAAAAGTTCTTGTAGTTCAACAACTTATCCAAGACTATGCTACACCTCCCTAGTGAAGCATGCCGATTTCATTCAAACAAATCATGTGCTTTTAACGGGCACAGCCTTGAATGTGACACTTGCATCGGCGAAATCAACCTCAGCTATGATGACAACTCTCGCCAAAAGGCAAGGGCTAAAGCCAAGTGAGGCTGCAGCTATGAAGGATTGTGTCGAAGTGTTAAGTGACTCTGTTGATGAACTTCGAAGGTCTATTGATGAGATGAGTCGTCTTAATACTTCAAATTTTGAGCTAACGATGAGTGATGTACAGACTTGGGTTAGTGCTGCTTTGACGGACCAAAGTACTTGTACCGATGGATTTCAAGAGGTTAATGCGGACGGAGAAATTAAGACTATAGTGAGAGGGAGAATTGTTCAAGTAGCTCAATTGACTAGCAATGCTCTGGCTCTAATAAATAAACTTGCCACTTCACATCCTTAA 594 0.4024 MEAFSSKILLINFAFTFITYSIQANEGPYQQSNTLFIKSSCSSTTYPRLCYTSLVKHADFIQTNHVLLTGTALNVTLASAKSTSAMMTTLAKRQGLKPSEAAAMKDCVEVLSDSVDELRRSIDEMSRLNTSNFELTMSDVQTWVSAALTDQSTCTDGFQEVNADGEIKTIVRGRIVQVAQLTSNALALINKLATSHP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01035 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Trre8g01035 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Trre8g01035 197 CDD PMEI-like_3 39 194 - -
Trre8g01035 197 FunFam Pectin methylesterase inhibitor 1 32 192 - -
Trre8g01035 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Trre8g01035 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 188 - -
Trre8g01035 197 Coils Coil 108 128 - -
Trre8g01035 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Trre8g01035 197 NCBIfam pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01035 Trre-Chr8 7410615 7411208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01035 37 192 Carbohydrate Esterase AT1G53830 33.333 1.87e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01035 - - psat:127105069 293.123