Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01034 ATGGAGGCCTTTTCTTCAAAGATGCTTCTAATAATTTTTGCCTTTAGTTTCATCACACATTCTATCCAAGCAAATAAAGGGCCATACCAACAATCCAACACATTATTCATTAGAAGTTCTTGTAGTTCAACAACTTATCCAAGACTATGCTACACTTCCCTAGTGAAGCATGCCGATTTGATTCAAACAAATCAAGTGCTTTTAACGGGCACGGCCTTGAACGTGACTCTTGCATCAGCGAAATCAACCTCGGCTATGATGTCCACTCTCGCTAAAAGTCAAGGGCTAAAGCCAGGAGAGGCTGCAGCTATGAAGGATTGTGTTGAAGTGTTAAGTGACTCCGTTGATGAACTCCGGAGGTCTATCGACGAGATGAGTCGTCTTAGTACTTCAAATTTCGAGCTAACAATGAGTGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATCAAAGTACATGTACCGATGGATTTCAAGAGGCTAATGCGAACGGAGAAATTAAGACTGTAGTGAGAGGGAGAATTGTTCAAGTAGCTCAATTGACTAGCAATGCTCTTGCTCTGTTAAACAAACTTGCCACTTCACATCCTTAA 594 0.4158 MEAFSSKMLLIIFAFSFITHSIQANKGPYQQSNTLFIRSSCSSTTYPRLCYTSLVKHADLIQTNQVLLTGTALNVTLASAKSTSAMMSTLAKSQGLKPGEAAAMKDCVEVLSDSVDELRRSIDEMSRLSTSNFELTMSDVQTWVSAALTDQSTCTDGFQEANANGEIKTVVRGRIVQVAQLTSNALALLNKLATSHP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01034 197 CDD PMEI-like_3 39 194 - -
Trre8g01034 197 FunFam Pectinesterase inhibitor 3 32 193 - -
Trre8g01034 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Trre8g01034 197 Coils Coil 108 128 - -
Trre8g01034 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Trre8g01034 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Trre8g01034 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 188 - -
Trre8g01034 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 194 IPR035513 -
Trre8g01034 197 NCBIfam pectinesterase inhibitor domain 8 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01034 Trre-Chr8 7406146 7406739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01034 37 192 Carbohydrate Esterase AT3G14310 32.075 6.15e-23 93.6