Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01033 ATGGAAGCCTTTTCTTCAAAGATTTTTCTAATAGTTTTTGCCTTTAGTTTCATCACATACTCTATCCAAGCAAATGAATCCAACATATTATTCATTAGAAGTTCTTGTAGTTCAACAACTTATCCAAGATTATGCTACACCTCCCTAGTGAAATATGCCGATTCCATTCAAACAAATCGCTTACGTTTAACAAACACGGCCTTGAATGTGACTCTTGCATCTGCAAAATCAACCTCGGTTTCGATGTCAACTATTGCTAAAAGCCAGGGACTTAATCCAAAAGAAGTTGCGGCTATGAAGGATTGCGTCGAAGTGCTAAGTGAATCCGTCGATGAACTCCGAAGGTCTATCAATGAGATTAGTCGTCTTAGTACTTCAAATTTTGAGCTAACGATGAGCGATGTTCAAACTTGGGTTAGTGCTGCTTTGACGGATGAGAACACTTGTACCGAAGGATTCCAAGAGATTAATGCAACGGGAAATATTAAGACAATTGTGAGAGGGAAAATTGTGCAAGTAGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCTGCTTCACATCCTTAA 579 0.3834 MEAFSSKIFLIVFAFSFITYSIQANESNILFIRSSCSSTTYPRLCYTSLVKYADSIQTNRLRLTNTALNVTLASAKSTSVSMSTIAKSQGLNPKEVAAMKDCVEVLSESVDELRRSINEISRLSTSNFELTMSDVQTWVSAALTDENTCTEGFQEINATGNIKTIVRGKIVQVAQLTSNALALINKLAASHP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01033 192 FunFam Pectinesterase inhibitor 3 27 188 - -
Trre8g01033 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 187 IPR035513 -
Trre8g01033 192 Coils Coil 103 123 - -
Trre8g01033 192 Pfam Plant invertase/pectin methylesterase inhibitor 31 183 IPR006501 GO:0004857
Trre8g01033 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 183 - -
Trre8g01033 192 SMART PMEI_2 27 183 IPR006501 GO:0004857
Trre8g01033 192 CDD PMEI-like_3 34 189 - -
Trre8g01033 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 189 IPR035513 -
Trre8g01033 192 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01033 Trre-Chr8 7396210 7396788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01033 32 187 Carbohydrate Esterase AT1G53830 31.447 4.41e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01033 - - psat:127105069 290.041