Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01031 ATGGCATTGCAATTGCATACTCTCATTGGATGTTCAATGAGTCACCATAATCTCTTCAAAATAATTTTTTCCATTCTATTCATCTCAACTCTTATTCACTCTACAACATCTACATCCAATTCCACCAAAAATTCCACTTCAACAATTTACAAAAAGTTTTTAAAGACTCAATGTAACTCAACCACATACCCAAATGTTTGCTACAAGTCACTTTCACCATACACATCAAAAATCAAAACAAACCCTTTAACACTCACCAAAATATCTATCTATCTAGCCCTAAAATCAGCAAGAAGTGCATCAATGACATTGAAAAGACTAAGTTCAAAGAAGCTAACGCATGCCGAAACATTAGTCATTGCCGATTGTAGCGAAAATGTCGGAGACACGGTGGATTCGCTTGAGGAATCGGCCGATGGGCTAGTGCATTTGAATGGTACTACAACTAATGATGAAAAGTTTAAATGGGATACTATAAAGACATGGATGAGTGCAGCTATAACTGATGAGGGCACATGTACGGATGAGTTTGATGAAATGGAAGTTAGGTCTTCAATAAAGAAGATGATCACCACAAGTGTTGGTAATCTTCTTTACATGACTAGTAATGCTTTGGCTTTTGTAAACAGGCTTTCCTTCTAG 642 0.366 MALQLHTLIGCSMSHHNLFKIIFSILFISTLIHSTTSTSNSTKNSTSTIYKKFLKTQCNSTTYPNVCYKSLSPYTSKIKTNPLTLTKISIYLALKSARSASMTLKRLSSKKLTHAETLVIADCSENVGDTVDSLEESADGLVHLNGTTTNDEKFKWDTIKTWMSAAITDEGTCTDEFDEMEVRSSIKKMITTSVGNLLYMTSNALAFVNRLSF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01031 213 CDD PMEI-like_3 58 212 - -
Trre8g01031 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 212 IPR035513 -
Trre8g01031 213 SMART PMEI_2 49 207 IPR006501 GO:0004857
Trre8g01031 213 Pfam Plant invertase/pectin methylesterase inhibitor 53 206 IPR006501 GO:0004857
Trre8g01031 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 207 - -
Trre8g01031 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 211 IPR035513 -
Trre8g01031 213 NCBIfam pectinesterase inhibitor domain 23 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01031 Trre-Chr8 7385351 7385992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01031 32 212 Carbohydrate Esterase AT1G53830 28.649 8.37e-15 70.9