Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00983 ATGGCTCATTTATTTTCAATCAACCTTAATACTTCTCATAAACTAGTTATATGTTCAAATTTGAGGTATTATGGTATTAAAACAACACCAAAAAATGCATGTTATAGAATTAGAAGAAGAAGAAGAACTTGGAGTAGTTCAATATTGCAATGCTGCAGTACAAGTAGTAGTAGTTCAGAACAATTATATTTTGCTGATCAGAAAGTGAAATTGGAAATTGAGAATGATAGTGAAAATATGAAGCAAAAAATTGATTTTTTGGTGTGTGAATATGGATGGAGAATAAGGAGATTGATTATGAATGCTGATGAGATCAAGATGGCAGCTGATGTTCAAGCTGAAGCTTTTCATGTTCCTGTGGCTCTTTTCAATAACTTGTTCTTTCAATTCTTTAAGGCTGAAGTGCTTTCGGGGCTCCTTTACAAGCTTAAAAACTCACCTCCCAATAGGTATGCTTGTTTAGTGGCTGAGAATGATCAAGATTCATCAAAACAACTTGTTGGTGTCATTGATGTTACTGTGATGAGAGACCCAGATGTGCTTCATCATCTACCTGATGAAGCACAAGAGTACCTTTACATATCAGGCATAGGTGTCTCCAATGCTTTCAGGAGGATGAAAATAGCAACTGCTATGTTAAAAGCATGTGACAAGATTTCCAATTTATGGGGTTATGAGTTTCTTGCACTTAGAGCTTATGAAGAAGATATAGGCGCAAGAACATTGTACACAAATGCTGGCTATCAACTTGTGTCTAAAGATCCACCATGGACAAGTAATTGGATTGGAAGAAAATGTCGTGTTCTTATGATCAAAAGAATTAGTTTATTGCCTAAGTAG 840 0.3524 MAHLFSINLNTSHKLVICSNLRYYGIKTTPKNACYRIRRRRRTWSSSILQCCSTSSSSSEQLYFADQKVKLEIENDSENMKQKIDFLVCEYGWRIRRLIMNADEIKMAADVQAEAFHVPVALFNNLFFQFFKAEVLSGLLYKLKNSPPNRYACLVAENDQDSSKQLVGVIDVTVMRDPDVLHHLPDEAQEYLYISGIGVSNAFRRMKIATAMLKACDKISNLWGYEFLALRAYEEDIGARTLYTNAGYQLVSKDPPWTSNWIGRKCRVLMIKRISLLPK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00983 279 Gene3D - 93 275 - -
Trre8g00983 279 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 110 275 IPR000182 GO:0016747
Trre8g00983 279 Pfam Acetyltransferase (GNAT) family 146 248 IPR000182 GO:0016747
Trre8g00983 279 CDD NAT_SF 153 230 - -
Trre8g00983 279 PANTHER N-ALPHA-ACETYLTRANSFERASE 90 275 - -
Trre8g00983 279 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 126 255 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00983 Trre-Chr8 7040526 7042873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre8g00983 Acetyltransf_1 6.9e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00983 - - gmx:100808330 370.548