Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00958 ATGGCTTCCACAGCAACACCTTCTTCACAAATTCTATTATTCAATCCAATCTTAGGAAACATCAAAACAATAAAAGGAGTAAGGTTTTTTAGGATAACAAAAACCACAAACTCTCACTACAGTTTGCAAGTTCATGCTTCTAAGGACTCTCAAGGACCCCAAAAAGCACCATCTGGAGGTGACACAAGAATTCATTGGGAGAATGAAGATGAAGGTTGGATTGGAGGTAGTACTAAACAGAAAGAAACCAATGAAGATGTGAAACCTAAGAAGCTTTTGGGTGAAGATTTTGCTGATTTGCTTAGTTTCCAAGGTTCTCATTATGAATTCTTAGGAGTATCACCAGAGTCTAGTGCTGAAGAAGTCAAAGTAGCATTCAGGAAACTATCAAAAGAGTATCATCCAGACACAACTTCCCTCCCACTAAAAACAGCCTCAGAAAAATTCATGAAATTAAAAGAGGTTTACACTGTTCTCAGTAATGAAGAAAGCAGGAGATTTTACGATTGGACCCTAGCACAAGAGGTTGCAAGTCGCCAACAAGAGAAATTGAAAATTAAATTTGAGGATCCTTATGAGGTAGAATTGAAGAATTATGAACCTGTTCCTGATATGGTTGATAGACTTGCTGGAAAGAATATGAAGCTTAGTGATCAAGCTGTTTCTGCTATCACTATTGATATTTTCATCATTATTTTTGCTATATGTTGTATCACATATGTAGTTTTATTTAAAGAATATTAG 744 0.3575 MASTATPSSQILLFNPILGNIKTIKGVRFFRITKTTNSHYSLQVHASKDSQGPQKAPSGGDTRIHWENEDEGWIGGSTKQKETNEDVKPKKLLGEDFADLLSFQGSHYEFLGVSPESSAEEVKVAFRKLSKEYHPDTTSLPLKTASEKFMKLKEVYTVLSNEESRRFYDWTLAQEVASRQQEKLKIKFEDPYEVELKNYEPVPDMVDRLAGKNMKLSDQAVSAITIDIFIIIFAICCITYVVLFKEY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00958 247 MobiDBLite consensus disorder prediction 44 66 - -
Trre8g00958 247 SUPERFAMILY Chaperone J-domain 101 168 IPR036869 -
Trre8g00958 247 ProSiteProfiles dnaJ domain profile. 106 172 IPR001623 -
Trre8g00958 247 FunFam DnaJ homolog subfamily C member 4 97 193 - -
Trre8g00958 247 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 246 IPR044618 -
Trre8g00958 247 SMART dnaj_3 105 164 IPR001623 -
Trre8g00958 247 Gene3D DnaJ domain 100 192 IPR036869 -
Trre8g00958 247 CDD DnaJ 107 161 IPR001623 -
Trre8g00958 247 PRINTS DnaJ domain signature 126 141 IPR001623 -
Trre8g00958 247 PRINTS DnaJ domain signature 144 164 IPR001623 -
Trre8g00958 247 PRINTS DnaJ domain signature 108 126 IPR001623 -
Trre8g00958 247 Pfam DnaJ domain 107 169 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00958 Trre-Chr8 6883622 6885163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00958 107 174 C2H2 Transcription Factor Family AT1G74250 37.500 1.55e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00958 K23051 - gmx:100819309 287.345