Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00935 ATGGAAAACTTAGGAACATTATTATCATCACTAAATTTGAATCCTAGAAAAGCAATTTTCACTATAATTGCTATGGTTTTGATATGGTGGATATGGAGTGCACTAGATTGGATTTGGTTTACACCAAAAAGAATAGAGAAACGTCTAAAACAACAAGGTCTTAAAGGAAATTCATATAGACTCATGGTTGGTGATATTAGAGATATGGTTAAGATGATTAAAGAAGCTAAATCTAAACCTATGGATCCTTACTCTAATGATATTGCTCCTCGTGTTTTGCCTTTTGTTGTTCATACCATTGCTAAATATGGGAAGAGTTCATTTATGTGGCTTGGTCCAAGACCTAGGATATTCATAATGGATCCAGACAAAATCAAAGAAATGACAAACAAGGTGTATGATTTTCAAAAACCAGATACAAGTCCACTTTTCAAGCTTCTAGCATCAGGCTTTGCAAATTATGATGGAGACAAATGGGCCAAACACAGAAAAATTGTCAGCCCAGCATTCAATGTGGAGAAAATGAAGATGTTGATACCAATATTTTGCAAATCATGTGATGATATGATCAACAAATTGGACAAAGTAGTAACTTCATCCGATGGGCCATGTGACGTAGATATATGGCCTTTCGTCCAAAATGTTTCAAGTGATGTCCTAGCTCGTGCAGGCTTTGGAAGTAGCTTTGAAGAAGGAAAAAGAGTTTTTGAACTTCAGAGTGAAATGCTTACACTTACAATAACCCTCTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTCTTGCCAACATATACCAACAGGAGGATGAAAGCAATTGACTTAGAAATAAGAACATCATTAATGAAAATCATAAACAGAAGATTAAAAGCAATGAAAGCAGGGGAACCTACAAACAATGACTTATTAGGCCTACTTTTGGAATCAAATTACAAAGAATCTGAAAAAGCTAATGGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTTGAAGATGTTAAGCTATTTTATTTGGCAGGACAAGAAGCAAATGCTGAATTGCTTGTTTGGACTTTGTTACTACTTGCTAAGAATCCTGAATGGCAAGCAAAGGCAAGGGAAGAAGCTTTTCAAGTGTTTGGTCATGAAAATCCAGATTATGAAAATATTGGTCAACTTAAAATTGTATCAATGATTCTACAAGAAAGTCTAAGGCTATATCCACCAGGTGTAATGATAGCAAGATTCCTTCGTAAAGACACAAAACTTGGAGACCTAACCCTACCTGCAGGAGTAGAAATCATAATACCAATATTAATGATACACCAAGAAAAAGAATTTTGGGGAGATGATTCTAGAGAGTTCAAACCAGAAAGATTCTCTGAAGGAGTTTCAAAAGCAACAAATGGAAAATTTTCTTACTTACCATTTGGAGGGGGTCCTAGACTTTGTATAGGACAAAATTTTGGCTTATTAGAAGCTAAAATTGCTGTCTCAATGATCCTTAGAAAATTTTCTTTAGAGTTTTCACCTTCCTATAAACATGCTCCTTCCTTTATTATTACTCTTCGGCCTGAGCATGGTGCACATCTCATTTTGCATAAACTTTAG 1584 0.3529 MENLGTLLSSLNLNPRKAIFTIIAMVLIWWIWSALDWIWFTPKRIEKRLKQQGLKGNSYRLMVGDIRDMVKMIKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKSSFMWLGPRPRIFIMDPDKIKEMTNKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKMKMLIPIFCKSCDDMINKLDKVVTSSDGPCDVDIWPFVQNVSSDVLARAGFGSSFEEGKRVFELQSEMLTLTITLFKFAFIPGYRFLPTYTNRRMKAIDLEIRTSLMKIINRRLKAMKAGEPTNNDLLGLLLESNYKESEKANGGGGMSLREVVEDVKLFYLAGQEANAELLVWTLLLLAKNPEWQAKAREEAFQVFGHENPDYENIGQLKIVSMILQESLRLYPPGVMIARFLRKDTKLGDLTLPAGVEIIIPILMIHQEKEFWGDDSREFKPERFSEGVSKATNGKFSYLPFGGGPRLCIGQNFGLLEAKIAVSMILRKFSLEFSPSYKHAPSFIITLRPEHGAHLILHKL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00935 527 FunFam Cytochrome P450 734A1 39 527 - -
Trre8g00935 527 Pfam Cytochrome P450 100 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 CDD CYP72 93 523 - -
Trre8g00935 527 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Trre8g00935 527 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 Gene3D Cytochrome P450 38 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00935 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 29 520 - -
Trre8g00935 527 SUPERFAMILY Cytochrome P450 91 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00935 Trre-Chr8 6713116 6717182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00935 21 527 Cytochrome P450 AT3G14690 52.071 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00935 - K24179 gmx:100801959 874.774