Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00924 ATGTTTGTGTTTCTGATCTTCATCATAAACACAATAGTCTTAGTAACATCAGCAGATCTAAAACCTGGGTATTACTCAAAAACATGTCCACAAGCTGAAACCATTGTCAGAAATGTTATGAAAAATTCTCTTAAGAAAGAACCAAGAAGTGTTGCCTCTATTATGCGTTTTCAATTCCATGATTGCTTTGTTAATGGGTGTGATGGTTCTTTGTTGCTTGATGATACACCAACTATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCACTTAGATCATTTGAAGTTGTTGATGAGATTAAAGAGGCTTTAGAGAAGGCTTGCCCTGGAGTTGTTTCTTGTGCTGATATCATAATCATGGCCTCTAGAGATGCTGTTGCACTGACAGGAGGACCAGATTGGCAGGTGAAGTTAGGAAGATTGGACAGCTTAACAGCAAGTCAAGATAACTCAAGTGATATCATGCCAAGTCCAAGATCCAATGCAACCACTCTAATCAATCTCTTCCAAAAATACAACCTCAATGTGAAGGATCTTGTAGCACTCTCAGGATCACACTCTATCGGAAAAGCTCGTTGTTTTTCGGTAATGTTCAGGCTATACAATCAATCCGGAAGCGGAAAACCTGACCCTGCAATGGATCCCGGTTTTAGAGCTGAGCTTGACAAGATATGTCCACTAAATGTTGATCAAAATGTGACAGTGAACCTCGATGCAACTCCGGTGATTTTCGATAATCAATATTTCAAGGATTTGGTTGCTGGAAGAGGATTTCTTAACTCTGATCAAACACTTTTCACATTCCCTCAAACACAAGGATTTGTTAGGCAATTTAGTATTGATCAAAATGAGTTTTTCAAAGCATTTGTTGAAGGAATGTTGAAATTGGGTGATTTGCAATCCGATAAACCTGGCGAGATTAGGAAGAATTGCAGAGTTGTCAATCCTCGCCCCGCGTCACATGTCCTGTATGAACACATGACGCAGAATAATGACCGATTGATATAA 1011 0.3907 MFVFLIFIINTIVLVTSADLKPGYYSKTCPQAETIVRNVMKNSLKKEPRSVASIMRFQFHDCFVNGCDGSLLLDDTPTMLGEKLALSNINSLRSFEVVDEIKEALEKACPGVVSCADIIIMASRDAVALTGGPDWQVKLGRLDSLTASQDNSSDIMPSPRSNATTLINLFQKYNLNVKDLVALSGSHSIGKARCFSVMFRLYNQSGSGKPDPAMDPGFRAELDKICPLNVDQNVTVNLDATPVIFDNQYFKDLVAGRGFLNSDQTLFTFPQTQGFVRQFSIDQNEFFKAFVEGMLKLGDLQSDKPGEIRKNCRVVNPRPASHVLYEHMTQNNDRLI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00924 336 PANTHER PEROXIDASE 72-RELATED 13 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 CDD secretory_peroxidase 20 315 IPR033905 GO:0004601|GO:0042744
Trre8g00924 336 Gene3D - 23 316 - -
Trre8g00924 336 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Trre8g00924 336 FunFam Peroxidase 23 166 - -
Trre8g00924 336 Pfam Peroxidase 36 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 ProSiteProfiles Plant heme peroxidase family profile. 19 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00924 336 FunFam Peroxidase 157 297 - -
Trre8g00924 336 Gene3D Peroxidase, domain 2 157 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00924 Trre-Chr8 6652345 6655151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00924 4 324 Peroxidase AT2G22420 72.274 7.43e-180 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00924 K00430 - gmx:100796737 517.309