Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00923 ATGTTTATGTTTCTGATCTTCATCATAAACATAATCTTAGTAACATCTGATCTAAAACCTGGGTATTACTCAAAAACATGTCCACAAGCTGAAATCATTGTCAGAGATGCTATGAAAAAAGCTCTTGCAAGAGAACCAAGAAGTGTTGCCTCTGTTATGCGATTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGCTTCTATGTTGCTTGATGATACACCAACTATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCACTTAGATCATTTGAAGTTGTTGATGAGGTGAAAGAAGCTGTGGAGAAGGCTTGTCCTGGAATTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCTGATTGGGAGGTGAAGTTAGGAAGGTTGGACAGCTTGACAGCCAGTCAAGAAGACTCGGACAACATCATGCCAAGTCCAAGAGCCAATGCGAGCACTCTCATCGATCTCTTCCAACGATTCAACCTCACTGTTAAAGACCTTGTTGCACTCTCAGGATCACACTCTATTGGCAAAGGTCGATGTTTTTCAATCATGTTTAGGCTATACAATCAATCCGGTAGCGGAAAACCAGACCCTGCAATTGATCCCACTTTTAGACAAGAGCTTGACAAGCTATGTCCACTAGATGTTGATCAAAATAAGACAGGGAACCTCGATGCAACTCCGGTGATTTTCGATAATCAATATTTCAAGGATTTGGTTGGTGGAAGAGGATTTCTTAACTCTGATCAAACACTTTTCACTTTCCCTAGAACAAAGGGGTTTGTTAGGTTCTATAGTAGAGATCAAAATGAATTTTTCAAAGCATTTGTTGAAGGAATGTTGAAAATGGGTGATTTACAGTCTGGTCGGCCTGGCGAAGTCAGGAGCAATTGCAGAGTTGCCAATGCTCGTGCTGCTAACATCCTGGTTGAACACAAGATACAGAAAAATGTTAAATCAATATGA 1002 0.4012 MFMFLIFIINIILVTSDLKPGYYSKTCPQAEIIVRDAMKKALAREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEAVEKACPGIVSCADIIIMASRDAVALTGGPDWEVKLGRLDSLTASQEDSDNIMPSPRANASTLIDLFQRFNLTVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIDPTFRQELDKLCPLDVDQNKTGNLDATPVIFDNQYFKDLVGGRGFLNSDQTLFTFPRTKGFVRFYSRDQNEFFKAFVEGMLKMGDLQSGRPGEVRSNCRVANARAANILVEHKIQKNVKSI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00923 333 ProSiteProfiles Plant heme peroxidase family profile. 17 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 Gene3D Peroxidase, domain 2 155 295 - -
Trre8g00923 333 Gene3D - 21 314 - -
Trre8g00923 333 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 FunFam Peroxidase 155 295 - -
Trre8g00923 333 PANTHER PEROXIDASE 72-RELATED 13 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 CDD secretory_peroxidase 18 312 IPR033905 GO:0004601|GO:0042744
Trre8g00923 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Trre8g00923 333 Pfam Peroxidase 34 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 SUPERFAMILY Heme-dependent peroxidases 18 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g00923 333 FunFam Peroxidase 21 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00923 Trre-Chr8 6648734 6651159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00923 2 322 Peroxidase AT2G22420 72.897 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00923 K00430 - gmx:100796737 536.184