Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00921 ATGTCGCTAAACATGAAAACCCTAACCCAAGCACTAGCAAAAACCGCAGCAGTAATAGAAAAAACGGTTCAAACAACGGTTCAAGAAGTAACCGGTCCAAAACCACTTCAAGATTACGAACTTCTCGATCAGATCGGTTCTGCAGGCCCGGGTTTAGCCTGGCGACTTTACTCGGCCCGTGCTCGTGATCCTTCTCGTCAACATCAGTATCCTGTTGTTTGTGTTTGGGTTTTGGATAAACGGGCTTTATGTGAGGCTAGGTTGCGTGCTGGATTGACCAAAGCTGCTGAGGATTCGTTTTTGGATTTGATTCGTACTGATGCTGGGAAGCTTGTTAGGTTAAGACATCCAGGGATTGTTCATGTTGTTCAGGGGCTTGATGAGAATAAGAATGCGATGGCGATGGTTACCGAACCGTTGTTTGCTTCTGTTGCTAATACTCTTGGTTGTTTTGATAATGTTGCTATTGTTCCTAAAGATCTTAAGGGAATGGAAATGGGTCTGTTGGAGGTAAAACATGGTTTACTTCAGATAGCAGAATCGTTGGATTTTCTCCACAACCATGCTCATCTTATTCATCGAGCTATATCACCTGAGAATGTTTTTATCACATTAAGTGGAGCCTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTTCTTCTCAGAACCCTGGTGACTCATCTAATCTGCATGCCTTCCATTATGCTGAATATGACGTTGAAGACTCTGTTTTGCCACTTCAGCCATCGATTAATTACACTGCTCCTGAGATGGTGAGGAACACTGCTTCTTCAGCTGGGTGCTATTCTGATATTTTCAGTTTTGGATGTCTTGCCTACCATTTAATTGCTCGCAAGCCGTTGTTTGATTGCCACAACAATGTCAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCATCGGATCTGGTTCCTGACTTGCAAAGGATGCTCTCTTCAAATGAATCTTTCAGGCCAACTGCAATGGATTTTACAGGCTCACAATTTTTTCGGAATGACACTAGGTTACGTGCTCTGCGCTTCCTGGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTAGTCATACAGCCGATGATTCTACCAATGGTTCTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTCCCAGCTCTTTTCCCTGTCTTAAGCACTGCTTCTGGTGATACAATGTTACTACTTCTAAAGCATGCCGAGCTAATAATAAACAAGACTAGTCAAGATCATTTGATTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCACGTTTACAAGAAGAGGTCCTAAAAAAATCAGTATCCCTTTCCAAGCAACTTGATGCCCAGCTGGTGAAACAAGTGATTTTGCCCCGTGTTCATGGACTAGCACTCAAAACAACAGTTGCTGCGGTTAGAGTCAATGCTTTGTTGTGCCTAGGAGACATGGTTAATCGACTTGATAAACATGCTGTCCTGGAAATCTTGCAAACTATTCAGCGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTCGGTGTTGCAAATTCTATTTTTAAGCAGTACGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTTTGCCACTCCTGACTGCTCAACAACTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGAATATGCTCCAGAAGATAGAAGAGAAGCGAGGAGTTGCTGTGACTGATTCTGGAATCCCAGAGGTAAGACTATCTTCTGCGGTTAACGGCCTTCAGGTGGAAGCTCCAAGGACAAGCAACAGCACCGTTGCTGCCTCAACAAAAAGCAGCTCCTGGGATGCAGATTGGGGTCCTAAAACAACGGGAACCGCCAATTCTGTCAAGAATTCTATTAATACATCCAGTCAATCTGTGATAGGCAACCCTGTGGGTCAAGTAACATCTTTACAAAATAATTTGTCCGTATCTGGTGTATCTAATCAGCAGACAGCCAAGTCATGTCCTTCAGTAGATTTAGAGTGGCCGCCTCGTGCATCTTCTGGTGTTACATCACAATTTGGTGATACTGAAAGACAAACAGTTCCAGCAGGAACCTCATCCACGTCTAATCTTGAAGATGACGATCCTTTTGCCGATTGGCCTCCGCGCCCTAGTGGCTCGTTATCTGGTGGATATGGAAATTCCAACAATGGTAGTATAGGAATGGAACTAAACAAGATGGGGCACAATTCAATGACAAGCAATTCAAGCAATCTTGGTCTCCAATCCAGCAACAATTGGTCTGTCAACTCCCAAAATTCTGTGGAGTCTATCGGTATGAACCCAAGGAATTCTAGTTCATCTATTGGTAACCCGAATAATGGCTTTGAACCTCAGAGTTCTCTTGGGTTCCTAAAACAAAGTCAGGCTTTTCCAGCACCAAATGTTGTTTCATCATCATCATCATATAATAATAACGTTAAATCAACTGATCTTGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCACCTAGACTTGCGCCACCCCCTTCAACCACAGTGGGTAGAGGACGGGGAAGAGGGAGAGGAGCGACTTCAACCAAACAATCCTCTCATACCAAGTCAAGCACTGATCAGCCACCCCTTTTGGATTTGTTGGGGTAG 2799 0.4312 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRALCEARLRAGLTKAAEDSFLDLIRTDAGKLVRLRHPGIVHVVQGLDENKNAMAMVTEPLFASVANTLGCFDNVAIVPKDLKGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENVFITLSGAWKLGGFGFAISSSQNPGDSSNLHAFHYAEYDVEDSVLPLQPSINYTAPEMVRNTASSAGCYSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQRMLSSNESFRPTAMDFTGSQFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALFPVLSTASGDTMLLLLKHAELIINKTSQDHLISHVLPMIVRAYDDNDARLQEEVLKKSVSLSKQLDAQLVKQVILPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVLEILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLLPLLTAQQLNVQQFAKYMLFVKNMLQKIEEKRGVAVTDSGIPEVRLSSAVNGLQVEAPRTSNSTVAASTKSSSWDADWGPKTTGTANSVKNSINTSSQSVIGNPVGQVTSLQNNLSVSGVSNQQTAKSCPSVDLEWPPRASSGVTSQFGDTERQTVPAGTSSTSNLEDDDPFADWPPRPSGSLSGGYGNSNNGSIGMELNKMGHNSMTSNSSNLGLQSSNNWSVNSQNSVESIGMNPRNSSSSIGNPNNGFEPQSSLGFLKQSQAFPAPNVVSSSSSYNNNVKSTDLGSIFSSNKNEQIAPRLAPPPSTTVGRGRGRGRGATSTKQSSHTKSSTDQPPLLDLLG 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00921 932 MobiDBLite consensus disorder prediction 728 756 - -
Trre8g00921 932 Pfam Protein kinase domain 108 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00921 932 MobiDBLite consensus disorder prediction 858 887 - -
Trre8g00921 932 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 36 920 - -
Trre8g00921 932 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00921 932 SUPERFAMILY ARM repeat 312 608 IPR016024 -
Trre8g00921 932 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Trre8g00921 932 CDD PK_SCY1_like 45 346 - -
Trre8g00921 932 Gene3D - 348 621 IPR011989 -
Trre8g00921 932 MobiDBLite consensus disorder prediction 710 844 - -
Trre8g00921 932 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00921 932 MobiDBLite consensus disorder prediction 858 932 - -
Trre8g00921 932 MobiDBLite consensus disorder prediction 771 844 - -
Trre8g00921 932 MobiDBLite consensus disorder prediction 647 679 - -
Trre8g00921 932 MobiDBLite consensus disorder prediction 908 925 - -
Trre8g00921 932 Gene3D Transferase(Phosphotransferase) domain 1 161 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00921 Trre-Chr8 6630190 6641267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00921 92 335 AGC Kinase Gene Family AT3G10540 23.790 5.92e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Trre8g00921 Pkinase 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00921 K17541 - gmx:100796211 1477.23