Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00882 ATGGCTAGTGTTACACATTCCATGGTGACATTCTTTGTATTATGTTTTATTGGTATAGTCTCATCTTCAAGTGTTATTCCTTCAGCAACTACTTTTGTGTCTTCTAATTTACCTACTCCTTATAGTCAATTGAGCTCCACTTTTTATGCTACAAAGTGTCCACAAGCTCTGCCTATCATTAAAGCATTCATAACCGGTGTTGTATGGAATGATCGCCGCATGGGTGCATCATTGCTCCGTCTTCATTTTCATGATTGTTTTGTTCAAGGCTGTGATGCATCAGTATTGTTAAAGGACACACCAACTTTTAAGGGAGAACAAAATGCCCTCCCGAATAGTAATTCTCTGAGAGGTTATGAAATCATAGATGGTGTAAAAGCTATATTAGAGAAAACATGTCCCAATGTTGTTTCTTGTGCAGATATTTTAGCTGTTGCAGCTAGAGATTCTGTTGTTGCTCTTGGTGGACCTGCCTGGCTAGTTCGTTTGGGCAGAAGAGATTCAACAACTGCAAATTTTAATGCTGCTAATAGTTCTGATTTACCATCTCCATTTCTTGATCTTAATGGCCTTATTGGTGCTTTCAAGAAAAAGGGTTTCTCAGCTGAAGAAATGGTTGCTTTGTCAGGTGCTCACACAATAGGAAAAGCAAAATGCGTCCTCTTCCGGAATAGGATTTACAACGAAAGAAACATAGATTCTAACTACGCGAAAACATTGCAAGGGTTCGTACCATGTCCAAAGAGTGGTGGCGATACAAACTTAGCTCCTTTTGACATCACAACTCCAACCTTCTTTGATAATGCATATTACAAAAATTTAGTGAACAAAAAGGGTCTTTTGCATTCTGATCAACAACTCTACAATGGTGGTTCTACCGATTACAAAGTTTCAGCATATGCCAATAATCCATTACTCTTCAATTTGGATTTCGCTAACGCGATGGTTAAGATGGGAAATCTCAGTCCTTTAACTGGAAATCAGGGCCAGATCAGAAAATATTGCAGCAGAGTGAATTAA 1020 0.3853 MASVTHSMVTFFVLCFIGIVSSSSVIPSATTFVSSNLPTPYSQLSSTFYATKCPQALPIIKAFITGVVWNDRRMGASLLRLHFHDCFVQGCDASVLLKDTPTFKGEQNALPNSNSLRGYEIIDGVKAILEKTCPNVVSCADILAVAARDSVVALGGPAWLVRLGRRDSTTANFNAANSSDLPSPFLDLNGLIGAFKKKGFSAEEMVALSGAHTIGKAKCVLFRNRIYNERNIDSNYAKTLQGFVPCPKSGGDTNLAPFDITTPTFFDNAYYKNLVNKKGLLHSDQQLYNGGSTDYKVSAYANNPLLFNLDFANAMVKMGNLSPLTGNQGQIRKYCSRVN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00882 339 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 CDD secretory_peroxidase 43 338 IPR033905 GO:0004601|GO:0042744
Trre8g00882 339 FunFam Peroxidase 47 190 - -
Trre8g00882 339 SUPERFAMILY Heme-dependent peroxidases 43 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 Gene3D - 47 336 - -
Trre8g00882 339 PANTHER PEROXIDASE 72-RELATED 41 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 Gene3D Peroxidase, domain 2 182 318 - -
Trre8g00882 339 Pfam Peroxidase 61 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Trre8g00882 339 FunFam Peroxidase 182 318 - -
Trre8g00882 339 ProSiteProfiles Plant heme peroxidase family profile. 43 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00882 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00882 Trre-Chr8 6387156 6389630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00882 42 339 Peroxidase AT5G05340 57.718 1.47e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00882 K00430 - qsu:112019242 408.683