Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00881 ATGGCTAGTGTTACACATTCCATGGTGACATTCTCTGTATTATGTTTTATTGGTATAGTCTCATCTTCAAGTACAATTCCTCAAGCAACTACTTTTGTGTCTTCTAATTTAACCGATCCTTATAGTGAGCTGAGCTCCACTTTTTATGCAACAAAGTGTCCTCTAGCTCTGCTTACCATTAAGGCATACATAACCGCTGTTGTATTGCAAGAACCTCGCATGGGTGCTTCATTGCTTCGTCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGACGCATCAGTATTGTTAAAGGACACACCAACTTTCAAAGGAGAACAAAATGCCTTACCAAATAACAATTCTCTAAGGGGTTATGAAATCATAGACAATGTAAAAGCTATATTAGAGATGATGTGTCCCAACGTTGTTTCTTGTGCAGATATCTTAGCTGTTGCAGCTAGAGATTCTGTTGTTGCTCTTGGTGGACCTGCATGGCTAGTTCATTTGGGCAGAAGAGATTCAACAACTGCAAATTTTAATGCTGCTAATTCTGATTTACCTGCTCCTTCTTTTGATCTTCCTGCCCTTATTAATGCCTTCAAGAAAAAGGGTTTCTCAGCTGATGAAATGGTTGTTTTGTCAGGTGCTCACACAATAGGAAAAGCAAAATGCACTTTATTCCGTGATAGGATTTACAACGAAAGCAACATAGAACCTAACTACGCGAAAACATTGCAAGGGTTCGTACCATGTCCAAAGAGTGGTGGCGATAACAACTTAGCTCCTTTTGACATCACAACTCCAACCTTCTTTGATAATACTTATTACAAAAATTTATTGAATAAAAAGGGTCTTTTGCACTCTGATCAACAACTCTACAATGGTGGTTCAACTGATTACAAAGTTTCGACATACGCCAATAATCCATCACTCTTCAGTTTGGATTTTGCTAACGCGATGGTTAAGGTGGGAAATCTCGGTCTTTTAACTGGAAACCAGGGTCAAATCAGAAAATATTGCAGCAGAGTGAATTGA 1017 0.3854 MASVTHSMVTFSVLCFIGIVSSSSTIPQATTFVSSNLTDPYSELSSTFYATKCPLALLTIKAYITAVVLQEPRMGASLLRLHFHDCFVQGCDASVLLKDTPTFKGEQNALPNNNSLRGYEIIDNVKAILEMMCPNVVSCADILAVAARDSVVALGGPAWLVHLGRRDSTTANFNAANSDLPAPSFDLPALINAFKKKGFSADEMVVLSGAHTIGKAKCTLFRDRIYNESNIEPNYAKTLQGFVPCPKSGGDNNLAPFDITTPTFFDNTYYKNLLNKKGLLHSDQQLYNGGSTDYKVSTYANNPSLFSLDFANAMVKVGNLGLLTGNQGQIRKYCSRVN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00881 338 SUPERFAMILY Heme-dependent peroxidases 44 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PANTHER PEROXIDASE 72-RELATED 42 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 Gene3D - 47 335 - -
Trre8g00881 338 ProSiteProfiles Plant heme peroxidase family profile. 43 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 FunFam Peroxidase 181 317 - -
Trre8g00881 338 CDD secretory_peroxidase 43 337 IPR033905 GO:0004601|GO:0042744
Trre8g00881 338 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Trre8g00881 338 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 FunFam Peroxidase 47 186 - -
Trre8g00881 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Trre8g00881 338 Gene3D Peroxidase, domain 2 181 317 - -
Trre8g00881 338 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00881 338 Pfam Peroxidase 62 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00881 Trre-Chr8 6383513 6385887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00881 42 338 Peroxidase AT5G05340 57.576 1.96e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00881 K00430 - gmx:100811432 406.371