Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00869 ATGAGGAATAACAAATTTAAGTTCTCAGATATGATTCCAAATGCTTGGTTCTACAAGCTAAAGGAAATAGGCAAAGGAAAAAACCAAACAACAACACCTTCTAAGAACAAACAACAACCTTCTTCATTAGCCTCAACAAAAACAACACATTCCTTAAAACAAAACCAACCAAATCAATGCAATCCTAGAAAATCATACTACTTTACAAGAGAACTTAACCAAAACAACATCAACAACACCAACAAATTTATCACTTCACCAAAAACAACACAACCACAAACACCATCCAAAAACAGAACAAGAACAAGAAAAAGAACAACTACAACAACATCAAAATCAAAATCAAAATCAAAAACATGTTCTTCTTCACCAAAACATGTTACCCCTTCTGTCTCTGCAGGTTGTAGTTGTCGAACTACACTTGAATCAGTGTGGAAAAAATCAGATTCTCCACAAGAAAACTCTTCTTCATCTCCACTTGATAGTTTCACTGGGTCGGGGTCAGAATCCCCCGACCCAGAATTTAGAACAGACCGTGTTCTGATTCCAACTGAAACCTCTTCGTTTGACGAAATGGTTTCGTTGTCTACTTCTTCTTGTGCTTGCAACAAAATCTCCAACAACAACATTGATGATATTGTTATTGATGTTGACAAGAATTCTCTATATAGAAAAGATGATAAAATTGAAAGGTATGATTATTCATATGATTCTTTTTCAAAGTTACAACTTCCTCGTATCATTACAAAACCTCCCATGAAAAAAGAACACAAACCCATCAATGAAGAGTCTCTAAAGATTAAAATTTTGAACCAACAAAAGCATCAAGAGAAGAAAAAGAAGAAGAAAATTGGTTCTGCAAATTCTCCTGGATTAAAACTTCGTTTAAAGTCTCCAAGAATTGCTTCTACAAAGAAAGTTCAGTTTCATCATGGCCGGAAAAGCGTGACATCATTGGCAACTTCCGGCTACCGGAGAAGCTTCTCCGGTAGCCTGGCAATAGTGAAGTCATCATTTAATCCTCAAAAGGATTTTAGAGAGTCTATGGTGGAGATGATTGTTGAGAATAACATAAGAGCATCTAAGGATTTGGAAGATCTTCTTGCTTGTTACCTTTCTTTAAATTCAGATGAGTATCATGATATTATTATCAAGGTTTTCAAGCAAATATGGTTTGATTTGACTGAAACAGGGTAG 1197 0.3517 MRNNKFKFSDMIPNAWFYKLKEIGKGKNQTTTPSKNKQQPSSLASTKTTHSLKQNQPNQCNPRKSYYFTRELNQNNINNTNKFITSPKTTQPQTPSKNRTRTRKRTTTTTSKSKSKSKTCSSSPKHVTPSVSAGCSCRTTLESVWKKSDSPQENSSSSPLDSFTGSGSESPDPEFRTDRVLIPTETSSFDEMVSLSTSSCACNKISNNNIDDIVIDVDKNSLYRKDDKIERYDYSYDSFSKLQLPRIITKPPMKKEHKPINEESLKIKILNQQKHQEKKKKKKIGSANSPGLKLRLKSPRIASTKKVQFHHGRKSVTSLATSGYRRSFSGSLAIVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDIIIKVFKQIWFDLTETG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00869 398 Coils Coil 260 280 - -
Trre8g00869 398 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 62 395 IPR038933 GO:0045892
Trre8g00869 398 MobiDBLite consensus disorder prediction 78 133 - -
Trre8g00869 398 ProSiteProfiles OVATE domain profile. 334 393 IPR006458 -
Trre8g00869 398 MobiDBLite consensus disorder prediction 146 171 - -
Trre8g00869 398 Pfam Transcriptional repressor, ovate 338 394 IPR006458 -
Trre8g00869 398 MobiDBLite consensus disorder prediction 146 177 - -
Trre8g00869 398 NCBIfam uncharacterized plant-specific domain TIGR01568 333 395 IPR006458 -
Trre8g00869 398 MobiDBLite consensus disorder prediction 112 133 - -
Trre8g00869 398 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Trre8g00869 398 MobiDBLite consensus disorder prediction 78 97 - -
Trre8g00869 398 MobiDBLite consensus disorder prediction 26 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00869 Trre-Chr8 6285323 6286519 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre8g00869 Ovate 3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00869 - - cam:101506553 423.32