Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00857 ATGTTGTCACTAATACTTTTTATTCTATGCCTAATAATTCTTCCATTGCTTATGTTCTTCCACAAACATAGAACCATTAAACATTATCCACTTGGTCCTAAAGGCCTTCCCATAATAGGAAATCTTCATCAACTAGACATTTCTATTCTTTATCTTCAACTTTCACAATTGTCAAAGATATATGGTCCTTTGTTTTCAATTAAACTTGGATTAAGACAAGCTATTGTTGTTTCTTCAGCTGAAATTGCCAAAGAAGTATTGAAAACCAATGACCATGTATTTTCTAATAGACCTATATTATATGGTCAACAAAAATTGTCTTATAATGGGTCAGAAATGATATTTTCACAATACAATGAATTTTGGAGAGAAATAAGAAAAATTTGTGTTGTTCATGTATTTAGTACCAAACGTATTACATATTATTCTTCTATAAGAAATTTTGAGGTGAAGAAAATGCTAAAAAAAATTTCAGGCCATGCTAGTTCTTCAAGTGGTACAAATATGAGTGAGGTGTTAATATCTCTTTCAAGTACTATAATTTGTAGGATTGCTTTTGGGAGAAGCTATGAGGGTGATGGAAATGAAAGAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCTTTGCTGGCAGAATTCTTTGTTTCTGATTATATTCCATTTATGGGTTGGTTTGATAAACTTAGAGGATTGCATGGTCGTCTTGATAGGAATTTCAAGAAATTTGATGAGTTTTATCAAGAAATTATCGATGAATATTTGGATCCAAATAGACAACAAACAGATGAAGAGGTTATTGTTGATGTCCTACTCCAATTGAAGAAAAAGCGTTCATTTTCTTTTGACATCACTTTTGATCACATCAAAGGAGTCCTCATGGATATGCTTGTAGCTGCAACAGATACCACATCGGCCACATCAGTTTGGGCTATGACCGCCCTAATAAAAAATCCAAGAGTAATGACTAAAGTACAAGAAGAAATTAGGAACTATGGAGGTAAAAGAGAATTTTTATATGAAGAAGATATTCAAAATTTACCATATTTTAAGGCAGTGATTAAAGAGACATTAAGATTGCACCTACCAACTCCACTACTTGTGCAAAGAGAATCACGTGAAAAATGCAGTATAGGTGGATACAACATTCCAGCCAAGACAATATTGTATGTCAATGCTTGGGCTATTCATAGGGACCCTAATATTTGGAAAAATCCAGAAGAATTTTATCCTGAAAGATTTTTAAAAAGTTCTATAAACTTTACTGGACAAGATTTTGAACTAATACCCTTTGGAGCTGGTCGTAGAATTTGCCCAGGTATGCCCATGGGAGTTGCCTCGGTGGAACTTATAGTTGCTAATCTTCTATATTCATTTGATTGGCAATTGCCAGATGGGATGGTTAAGGAAAATATTGATACAGAAATGTTGCCAGGGATCACCCAACACAAAAAAAATCCTCTTTGCCTTGTTGCCAAGATCCCTATGTAG 1491 0.338 MLSLILFILCLIILPLLMFFHKHRTIKHYPLGPKGLPIIGNLHQLDISILYLQLSQLSKIYGPLFSIKLGLRQAIVVSSAEIAKEVLKTNDHVFSNRPILYGQQKLSYNGSEMIFSQYNEFWREIRKICVVHVFSTKRITYYSSIRNFEVKKMLKKISGHASSSSGTNMSEVLISLSSTIICRIAFGRSYEGDGNERSRFHGLLHEFQALLAEFFVSDYIPFMGWFDKLRGLHGRLDRNFKKFDEFYQEIIDEYLDPNRQQTDEEVIVDVLLQLKKKRSFSFDITFDHIKGVLMDMLVAATDTTSATSVWAMTALIKNPRVMTKVQEEIRNYGGKREFLYEEDIQNLPYFKAVIKETLRLHLPTPLLVQRESREKCSIGGYNIPAKTILYVNAWAIHRDPNIWKNPEEFYPERFLKSSINFTGQDFELIPFGAGRRICPGMPMGVASVELIVANLLYSFDWQLPDGMVKENIDTEMLPGITQHKKNPLCLVAKIPM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00857 496 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre8g00857 496 FunFam Cytochrome P450 83B1 17 491 - -
Trre8g00857 496 Pfam Cytochrome P450 30 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 Gene3D Cytochrome P450 22 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PANTHER CYTOCHROME P450 71B11-RELATED 14 492 - -
Trre8g00857 496 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 SUPERFAMILY Cytochrome P450 31 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00857 496 CDD CYP71-like 61 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00857 Trre-Chr8 6158654 6160534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00857 5 491 Cytochrome P450 AT4G31500 47.154 8.47e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00857 - - gmx:100787727 702.205