Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00851 ATGGGATGTTTCCTTGTTTTCAAGAACTTGAAGAAAAAGTATGAAAAATACAAATCAAAAAGTAGCAGGAATAATGAGCATGTATCTACAACAATGCCTCATCTTCAAGCTTCTCGCTCATTGCACTCCGGTCCTCCAATTTTGAGGCCTAGCATGATTTCCAATAACCTGATTAACCGAGTTTCAAACAACATAACAAGAGTCTTATCTTCTCCATCAGCTCTTGATGCTGCAGAACAAGGAGCTCTAGCCTCAATTGAGAAGGATGAACAAGAAATGTCGGATGTTCCGGCAAGAATAATAAGGGAGCCGCACACACCTATTCCACAACCTTTACCTCTTCCACGACCTCCTCAAGGAAGTAGTCCATTGGCATTAAGGATGACTAGGAGTCCTTTATATTCTTCTGGCCCAGCTCTTGATGCAGCAAATCAAGATGGTTTGGAAACATTTCGGTATGAAGAAAAAGAATGGTTTAAAAACCGAGATAGATTGATGAAGGCAAGACCTTTACCGCTTCCACCTCTTCAAGAAACAAGTCCAATGAAGGCTGCTAGCAGCTCTAAGTCAGGAAAAGCTATTGATTCGGTTCTTTATTTTCAATATGAGAAGATTGCTGCTGCTTGCCACAACTTCTCTATATATCGACGCATGTCAGAAGGTCTTTCTTCCACGATATATAAAGCTTCCTTTGATCATGAAGCTACAAGCAAGAAGCTTAAAGCCACTGTCACATGCCTTCACCAATCAACTCAGGGGTTGAAGGAATTCATGAATGAGGTTAATACTCTTGCAAATTTGCAACATCCAAACCTCTGTAAACTGCTCGGATTTTATGCAAGCGATAGCTCTGAACCAAGGATGTTGGTTTATGAGAGGCTGAGCAACGGGAGCTTGGACCGCCTGTTGTTTGGGAAATCTGCCGGCCCTTCAATTGATTGGAACACAAGAATAAAAATCGCCATTTGTGCTGCACAAGCTCTTACTTTCTTGCATGAAGAAGGGCCTCTCCAGGCAATGTATAATGATTTTTCAGCATTGAACATACAGATTGACATGGATTTCAATGCAAAGCTTTCAGGATATGGTTTTGTTCGACATATTGCTGAGGGAGAGCTTTTAAGAAGTTCACATGCTGCAGCTAACCTTTCAATGGAGACATTGGAAAAAGGATTGCTTACTCCAAAGAGCAACGTATGGAGTTTTGGAATTGTTCTTCTGGAGCTACTTACTGGTAGAAAGAATTTTGATAGGAAATTCCCAAAGAAAGAGAGGAACTTAGTCAAGTGGTGCAGGCCTTACCTAGCGGACGATTTTCAGTTGTCAGTGATCATGGATTCTCAGCTCAAAGGTCAGTTTTCACTCAAGGCAGCAAGAACATTAGCTAGCATTGTACAAAGATGCCTCCAAAGGGAGCCACCAGAAAGACCAACCATGAGAACCATTCTTGAGATTCTCAAAACCATACCAGATATGAAGTACCCTAGTTTTTTCCCACTGCTAGAGCCAGCAGCCATTTATGGACAACACATGTCGAGATCACCACGTGTTGAGCCAGCAGCCATTAATGCACCTAGATTGGGTTTCTCTCCATTACTACCATCAGCTCTCAGAACATCTATGTTACATCCTCCAAGATGGTCTGGTGTGCCCACAAAGCTTCCTTCTCCTCTTGGTTGTTCCTCGGCTGTCTCTACTGAAGAACTCACTAGGCAGGAAAGTACACGGTCACTATCCTCGGTAAACAAGAAAGCTTAG 1758 0.4243 MGCFLVFKNLKKKYEKYKSKSSRNNEHVSTTMPHLQASRSLHSGPPILRPSMISNNLINRVSNNITRVLSSPSALDAAEQGALASIEKDEQEMSDVPARIIREPHTPIPQPLPLPRPPQGSSPLALRMTRSPLYSSGPALDAANQDGLETFRYEEKEWFKNRDRLMKARPLPLPPLQETSPMKAASSSKSGKAIDSVLYFQYEKIAAACHNFSIYRRMSEGLSSTIYKASFDHEATSKKLKATVTCLHQSTQGLKEFMNEVNTLANLQHPNLCKLLGFYASDSSEPRMLVYERLSNGSLDRLLFGKSAGPSIDWNTRIKIAICAAQALTFLHEEGPLQAMYNDFSALNIQIDMDFNAKLSGYGFVRHIAEGELLRSSHAAANLSMETLEKGLLTPKSNVWSFGIVLLELLTGRKNFDRKFPKKERNLVKWCRPYLADDFQLSVIMDSQLKGQFSLKAARTLASIVQRCLQREPPERPTMRTILEILKTIPDMKYPSFFPLLEPAAIYGQHMSRSPRVEPAAINAPRLGFSPLLPSALRTSMLHPPRWSGVPTKLPSPLGCSSAVSTEELTRQESTRSLSSVNKKA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00851 585 MobiDBLite consensus disorder prediction 18 40 - -
Trre8g00851 585 MobiDBLite consensus disorder prediction 553 585 - -
Trre8g00851 585 SUPERFAMILY Protein kinase-like (PK-like) 192 498 IPR011009 -
Trre8g00851 585 MobiDBLite consensus disorder prediction 24 38 - -
Trre8g00851 585 ProSiteProfiles Protein kinase domain profile. 212 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00851 585 PANTHER OS01G0588500 PROTEIN-RELATED 174 488 - -
Trre8g00851 585 MobiDBLite consensus disorder prediction 558 585 - -
Trre8g00851 585 Gene3D Transferase(Phosphotransferase) domain 1 294 496 - -
Trre8g00851 585 Pfam Protein tyrosine and serine/threonine kinase 214 486 IPR001245 GO:0004672|GO:0006468
Trre8g00851 585 Gene3D Phosphorylase Kinase; domain 1 177 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00851 Trre-Chr8 6105144 6107612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00851 196 489 Receptor kinase-like Gene Family AT4G02010 35.099 1.31e-50 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Trre8g00851 PK_Tyr_Ser-Thr 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00851 - - aprc:113849641 580.867