Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00834 ATGGACCCAACGAACCTTGTTGTTCTTTCATCTCAGAACTTGAAAGAATGTACAAACAATTTCAATCCAAACAATCTTATTGGGTTGACACAATTTGGAAGATTGTTTAGAGGAAACTTTCAAGGTCAACATGTATTAGTGAAGATATTAGATGATGAAAAATTGAAGCACATAAGTTCTAAATATAATGATGAGTATTTCATTATCAAAGAGGAAATAAAGTTTTGGACAAACCCAATTTTGAAAGATTGTCCTAACTTGACTACTTTGATTGGTTATACTTGTGAGAGAGATATAAAAGGGCTTGTGTATGATATTAATCCCCTTGATACTTTGGACAATGTAATCAAGAAAGATGAAATGAATTGGGTTCAGAGAATAAATGTAATTCATGAGGTTGCTAAGCTCTTGAAGTTCATTCATGACCAAGAGAAACAAAACATGGTGTTGAATATTAGTGCATCTCATATACTTCTTGACAAGGATTTAAAATCAAAATTATTCGACTTGCTGTTGCTTAGTGAAGTGAAAATGTTAAAGGAACAATCAACAATGTCAACTAGCTACATTGATCCTTATTTTTCTCTAAGGGCAGGTGGTGAATGGGATAGAAGCTCTGAAGTGTATTCATTTGGCATAATCTTGCTTGAACTATTAACAAAGAGAATTTCAAGCATTGGGAACAGAGAACAAAATACAAACTTAAATATGGATAGTCTAATAAATATTTTCCCTCCTAATTTCTCTTAA 750 0.32 MDPTNLVVLSSQNLKECTNNFNPNNLIGLTQFGRLFRGNFQGQHVLVKILDDEKLKHISSKYNDEYFIIKEEIKFWTNPILKDCPNLTTLIGYTCERDIKGLVYDINPLDTLDNVIKKDEMNWVQRINVIHEVAKLLKFIHDQEKQNMVLNISASHILLDKDLKSKLFDLLLLSEVKMLKEQSTMSTSYIDPYFSLRAGGEWDRSSEVYSFGIILLELLTKRISSIGNREQNTNLNMDSLINIFPPNFS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00834 249 SUPERFAMILY Protein kinase-like (PK-like) 16 241 IPR011009 -
Trre8g00834 249 Gene3D Transferase(Phosphotransferase) domain 1 108 248 - -
Trre8g00834 249 ProSiteProfiles Protein kinase domain profile. 21 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00834 249 Pfam Protein tyrosine and serine/threonine kinase 25 222 IPR001245 GO:0004672|GO:0006468
Trre8g00834 249 Gene3D Phosphorylase Kinase; domain 1 2 105 - -
Trre8g00834 249 PANTHER OS01G0588500 PROTEIN-RELATED 5 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00834 Trre-Chr8 5944934 5946932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00834 9 222 Receptor kinase-like Gene Family AT4G23150 29.778 1.33e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre8g00834 PK_Tyr_Ser-Thr 3.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00834 - - gmx:102662076 341.658