Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00833 ATGGACCCAACGAACCTTGTTGTTCTTTCATCTCAGAACTTGAAAGAATGTACAAACAATTTCAATCCAAACAATCTTATTGGGTTGACACAATTTGGAAGATTGTTTAGAGGAAACTTTCAAGGTCAACATGTATTAGTGAAGATATTAGATGATGAAAAATTGAAGCACATAAGTTCTAAATATAATGATGAGTATTTCATTATCAAAGAGGAAATAAAGTTTTGGACAAACCCAATTTTGAAAGATTGTCCTAACTTGACTACTTTGATTGGTTATACTTGTGAGAGAGATATAAAAGGGCTTGTGTATGATATTAATCCCCTTGATACTTTGGACAATGTAATCAAGAAAGATGAAATGAATTGGGTTCAGAGAATAAATGTAATTCATGAGGTTGCTAAGCTCTTGAAGTTCATTCATGACCAAGAGAAACAAAACATGGTGTTGAATATTAGTGCATCTCATATACTTCTTGACAAGGATTTAAAATCAAAATTATTCGACTTGCTGTTGCTTAGTGAAGTGAAAATGTTAAAGGAACAATCAACAATGTCAACTAGCTACATTGATCCTTATTTTTCTCTAAGGGGTGGTGAATGGGATAGAAGCTCTGAAGTGTATTCATTTGGCATAATCTTGCTTGAACTATTAACAAAGAGAATTTCAAGCATTGGGAACAGAGAACAAAATACAAACTTAAATATGGATAGTCTAATAAATATTTTCCCTCCTAATTTCTCTTAA 747 0.3186 MDPTNLVVLSSQNLKECTNNFNPNNLIGLTQFGRLFRGNFQGQHVLVKILDDEKLKHISSKYNDEYFIIKEEIKFWTNPILKDCPNLTTLIGYTCERDIKGLVYDINPLDTLDNVIKKDEMNWVQRINVIHEVAKLLKFIHDQEKQNMVLNISASHILLDKDLKSKLFDLLLLSEVKMLKEQSTMSTSYIDPYFSLRGGEWDRSSEVYSFGIILLELLTKRISSIGNREQNTNLNMDSLINIFPPNFS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00833 248 Gene3D Transferase(Phosphotransferase) domain 1 108 247 - -
Trre8g00833 248 SUPERFAMILY Protein kinase-like (PK-like) 16 240 IPR011009 -
Trre8g00833 248 ProSiteProfiles Protein kinase domain profile. 21 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00833 248 Pfam Protein tyrosine and serine/threonine kinase 25 221 IPR001245 GO:0004672|GO:0006468
Trre8g00833 248 Gene3D Phosphorylase Kinase; domain 1 2 105 - -
Trre8g00833 248 PANTHER OS01G0588500 PROTEIN-RELATED 5 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00833 Trre-Chr8 5944934 5946932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00833 9 221 Receptor kinase-like Gene Family AT4G23150 29.911 9.78e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre8g00833 PK_Tyr_Ser-Thr 5.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00833 - - gmx:102662076 346.28