Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00827 ATGAAGGACATGCCCTTACCTTTTGAGGAATTTCAAGTGAAGGGAGGTGTGTTGGATTATTATTTCTCTTCAACTTCAAATTCAGCTTCAGATTCATTTTCATTGCTTTTGAATCAACCACAAGGGCAACAAAATCAGCAAATTGGACATTGGATAAAGAAGATTATTGCCACTTCTGTTCTTGATTCAAGTAGAAGCCCTAGTCCTCCAATTTCATCTTCAACAATGTCATCTTCTCTTGGTAGTGGTAGTAATAATAATGGTAATGGTTCAAACAATACCAACAACAATACTTCAATGGTAGTTGTTTCTGAGAATCTTGCTCCTAATCTTTCAAATGAAGAAGGTTTGGAGAATAGTGGTGAAAAATGTGGTGGTATGAGAATGGAAGATTGGGAGGGACAAGATCAGTCACTTTTAAGGTTAATTATGGGAGATGTTGAAGACCCTTCTGTTGGTTTGAACAAAATCTTGCAAAATAGTGATGTTGGTTCTCAAAATGTTGATTTTCATGGTGGTTTTGGTGTTTTGGATCATCAACAAGGTTTGAACAATAACATGGAAGGTTCTGTTCAACAAGGGAATTACAATGTTTTTCCTTTCATGTCTGAAAACATAGATAGTCACAATGCAAAATCTGGTCCTGAATCTATGTTTGGTAACTATCCTATGTTGACATCATCATCAACTTCTGGTGTGTTTTGTTCTCAGCAGCAACAGAATCAAGAGTTTGGTGTTGTTGATGATAAACCACAAGTTATTAACCCTAATTTTATGATGAATCATAATCAAGTTCAATTCTCAGAGAATCCTTCATTCTTTGTTCCATTGCCATATCCTCAAGTGCAAGAGCAACAAGGTTTCTCTCAGAATCAGTTGAAACGGCCGCTTTTCGATACGGTCGGGAACAATTATTCTGTACCGAGGTTACCGCTTTTGGATTCTGGCCAAGAAATGTTTGCTAGGAGGCTTCAGCAACAAGCACAGCTTCCATTGTTTCCTCATCATCATCTGCAGCAGCATGAACAACAACAGCAATCATCGGTTGTTCCGTTTGCGAAGCAGCAGAAGGTGAGTTCTATTATTGCCGGAGACGATGCAAGCAACCAGCTTCAGCAGAGTATATTTGATCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTCAAAGGGCTTCTTTCTATGTGAAGGAAGCCTTACAGTTAATGCTTCATTCAAACGGTAACAATCTCAATGCTTTTTCACCGATTAGTTTCATATTCAAAATTGGAGCTTACAAGTCTTTTTCCGAGATATCTCCTGTTCTTCAGTTCTCCAACTTTACTTGTAATCAAGTCCTAATTGAAGCCTTGGAAAGGTTCGACCGAATTCACATTGTTGATTTCGATATAGGGTTTGGAGTACAATGGTCTTCTTTTATGCAAGAGCTTGTGTTAAGAGGTAACGGTATACCTTCACTTAAGATTACTGCTGTTGTATCGCCCTCGTCTTGCAACGAGATTGAGCTCAATTTCACCCAAGAAAATCTGAGTCAGTATGCGAAAGACCTCAACATGCCGTTTGAGTTCAGTATTTTGAACATGGAATTCTTGAACTCACCGTCGTTTCCTCAATCAGCTCATTTCTTTGATAGTAACGAGGCTATTGGCGTGAACTTTCCTGTTTCAAGTTTCATAAGTTGTCCATCATCTTTCCCTTTGGCCCTTCACTTTGTCAAGCAGATAAGGCCCAAAGTGGTTGTCACTTTGGATAAAAATTGCGACCGTCTTGATGTTCCGCTTCCGACTAACGTTGTTCATGTTCTTCAATGTTACTCATCCTCGCTCGAATCACTTGATGCTGTAAACGTGAACCTCGACGTACTCCAAAAGATTGAGAGGCATTTCATCCAACCAAACATCAACAAAATCGTCCTCGGTCACCACCACCGTTCGCAAGAGAAATTACCTCCGTGGAGGAACATGTTTCTTCAATCCGGTTTCTCTCCTTTCACATTCAGCAACTTCACGGAAGCTCAAGCCGAGTGTTTGGTTCAAAGGGCACCTGTGAGAGGATTTCAAGTGGAAAGAAAGTCTTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAATTTCAACTTGGAGATGCTGA 2208 0.4031 MKDMPLPFEEFQVKGGVLDYYFSSTSNSASDSFSLLLNQPQGQQNQQIGHWIKKIIATSVLDSSRSPSPPISSSTMSSSLGSGSNNNGNGSNNTNNNTSMVVVSENLAPNLSNEEGLENSGEKCGGMRMEDWEGQDQSLLRLIMGDVEDPSVGLNKILQNSDVGSQNVDFHGGFGVLDHQQGLNNNMEGSVQQGNYNVFPFMSENIDSHNAKSGPESMFGNYPMLTSSSTSGVFCSQQQQNQEFGVVDDKPQVINPNFMMNHNQVQFSENPSFFVPLPYPQVQEQQGFSQNQLKRPLFDTVGNNYSVPRLPLLDSGQEMFARRLQQQAQLPLFPHHHLQQHEQQQQSSVVPFAKQQKVSSIIAGDDASNQLQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFQRASFYVKEALQLMLHSNGNNLNAFSPISFIFKIGAYKSFSEISPVLQFSNFTCNQVLIEALERFDRIHIVDFDIGFGVQWSSFMQELVLRGNGIPSLKITAVVSPSSCNEIELNFTQENLSQYAKDLNMPFEFSILNMEFLNSPSFPQSAHFFDSNEAIGVNFPVSSFISCPSSFPLALHFVKQIRPKVVVTLDKNCDRLDVPLPTNVVHVLQCYSSSLESLDAVNVNLDVLQKIERHFIQPNINKIVLGHHHRSQEKLPPWRNMFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFQVERKSSSLVLCWQRKELISISTWRC 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00827 735 ProSiteProfiles GRAS family profile. 366 734 IPR005202 -
Trre8g00827 735 MobiDBLite consensus disorder prediction 62 98 - -
Trre8g00827 735 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 334 729 IPR005202 -
Trre8g00827 735 Pfam GRAS domain family 377 734 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00827 Trre-Chr8 5909460 5911667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00827 375 735 GRAS Transcription Factor Family AT4G00150 53.719 1.81e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre8g00827 GRAS 5.8e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00827 - - psat:127101146 1045.03