Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00820 ATGTTGTCACTACTACTACTCCTTGTTTTGTGCATAATTTGTCCATTACTTTTGTTCTTCCTTAAACGTAGAAGAACCAATATTGCACCTTATCCACCTGGTCCTAGAGGCTTACCCATAATAGGGAATCTTCATCAGCTAGATAATTCTATTCTTTATCTTCAATTTTCAAAACTCTCAAAAATTTATGGACCATTATTTTCACTCCAACTAGGTTTAAGGCCAGCTATTGTTGTTTCTTCAGCTAAAATTGCCAAAGAAATATTTAAAAACAATGATCATGCGTTTTCTAATAGACCAATCTTATATGGCCAACATAAATTATCATATAATGGTTTAGATATTGTATTTTCTCAATATAGTGATTTTTGGAGAGATATAAGAAAAACTTGTGTTATTCATATATTTAGCAACAAGCGTATTTCATCTTATTCCTCTATAAGAAAATCTGAGGTGAAGAAAATGATCAAAAAAATTTCTAATCATGCTTCTTCTTCGGTTTTTACAAATTTGAGTGAATTATTTAGTTCTCTCTCAAGTAAAATAATTTGTAGGATTGCTTTTGGGATGAGGTATGAGGATGAAGGATTAGAGAGTAGTAAATTCCATGGAATGTTGCATGAGTTTGAGGCTATGTTAACGGCTTTCTTTGTTTCTGATTATATTCCATTTATGGGTTGGATTGATAAACTTAGAGGATTGCATAGTCGTCTTGATAGAATTTTCAAGGAGTTTGATGAGTTTTACCAAGAGGTTATTGATGAACATTTGGATCCAAATAGACTACAATTAGATGAAGAAGTTATTGTTGATGTCTTACTCCAATTGAAGAAACAAAATTTGTTTCCAATTGATCTCACTTTTGATCACATCAAAGGAGTCCTCATGAATTTGCTTGTAGCTGCAACAGATACCACATCAGCCACATTAGTTTGGACAATGACTGCACTAATAAGAAATCCTAAAGTAATGAAGAGAGTACAACAAGAAATTAGGAGTTCAAGAGTTAAAAAAGATTTTCTAGATGAAGATGATATACAAAATTTCTTTTACTTAAAAGCAGTCATAAAAGAGACGCTGAGATTGTACCTACCAAACACATTGCTTGTGCCAAGGGAAACAAGGGATAATTGTATTATAGGTGGCTACCAAATTCCAGCAAAAACAATAGTATATGTGAATGCATGGGATATACATAGAGACTCTGATGTTTGGAAAGATCCAGAAGAGTTTTATCCAGAGAGATTTTTAAAAAGTTCTATAAATTTTTTGGGACAAGATTTTGAATTCATTCCTTTTGGAGCTGGTCGTAGAATATGCCCGGGTATTTCTATGGCCGTTGCATCATTGGAACTTATCCTTGCTAATCTTCTTTATTCGTTTGATTGGGAATTGCCAAATGGATTGGTAAAGGAAGATATTGATTTTGAAATGTTGCCGGGAATTGCTCAACACAAGAAGAATCATCTTTGCCTTTCTGCAAAGATCCTTATGTAG 1497 0.33 MLSLLLLLVLCIICPLLLFFLKRRRTNIAPYPPGPRGLPIIGNLHQLDNSILYLQFSKLSKIYGPLFSLQLGLRPAIVVSSAKIAKEIFKNNDHAFSNRPILYGQHKLSYNGLDIVFSQYSDFWRDIRKTCVIHIFSNKRISSYSSIRKSEVKKMIKKISNHASSSVFTNLSELFSSLSSKIICRIAFGMRYEDEGLESSKFHGMLHEFEAMLTAFFVSDYIPFMGWIDKLRGLHSRLDRIFKEFDEFYQEVIDEHLDPNRLQLDEEVIVDVLLQLKKQNLFPIDLTFDHIKGVLMNLLVAATDTTSATLVWTMTALIRNPKVMKRVQQEIRSSRVKKDFLDEDDIQNFFYLKAVIKETLRLYLPNTLLVPRETRDNCIIGGYQIPAKTIVYVNAWDIHRDSDVWKDPEEFYPERFLKSSINFLGQDFEFIPFGAGRRICPGISMAVASLELILANLLYSFDWELPNGLVKEDIDFEMLPGIAQHKKNHLCLSAKILM 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00820 498 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 Gene3D Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 FunFam Cytochrome P450 83B1 19 493 - -
Trre8g00820 498 PANTHER CYTOCHROME P450 71B11-RELATED 14 494 - -
Trre8g00820 498 Pfam Cytochrome P450 32 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Trre8g00820 498 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 CDD CYP71-like 63 490 - -
Trre8g00820 498 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g00820 498 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00820 Trre-Chr8 5814054 5815893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00820 5 493 Cytochrome P450 AT4G31500 44.309 7.25e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00820 - - lja:Lj3g3v1475790.2 689.878