Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00787 ATGGCACAAAAACTCATTATCCCATCACTAGTCATTTTTCTCTCCCTCTTCTTAGAATCCTCCCTAGCCAAACATAACCCTCAAACAATAACCTACATAGAATCCTCTTGCAATGGTACCCTCTACCCTAAACTATGCATTCGTTGTCTTAACAAATTTTCCAAGTCAACCATAAATGGACCTCAACACTTAGCCCAAGTTGCCTTATCCGTGAGCCTCTCTAGAGCCCTACAAACAAGAGGGTACCTTTTGAATGTTGCTAAAGAACTCAAAGCAATTGATCATAAAAACAAAAGGATGTACCTAACCGTGCAAGATTGTGTGAATCAAATCAATGATAGTGTTGACCAACTTAGCCAAGCTATCAAAGAATTAAAAAGGTTGAACAATTTTAACACCATCATCAATGATAAAGTGTTGTGGCATATAAGTAATGTTGAGACATGGGTCAGCACGGCCTTAACCGACGCAAGTAGTTGTGTGCAATCATTCCCCGGTCATAGGATGAGCAAAAGGGTTGCGACGATTAAGGTTAAGGCGAAGAATGTTGCGGAAGTTACTAGTAATGCACTTGCTTTGTTTCATAGTTATGCTTCTAGTTACAAGCAAGCAGCAGCTAGAGCTACCAAGAAGCCTTGA 639 0.4022 MAQKLIIPSLVIFLSLFLESSLAKHNPQTITYIESSCNGTLYPKLCIRCLNKFSKSTINGPQHLAQVALSVSLSRALQTRGYLLNVAKELKAIDHKNKRMYLTVQDCVNQINDSVDQLSQAIKELKRLNNFNTIINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRVATIKVKAKNVAEVTSNALALFHSYASSYKQAAARATKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00787 212 FunFam Pectinesterase inhibitor 3 28 198 - -
Trre8g00787 212 NCBIfam pectinesterase inhibitor domain 6 197 IPR006501 GO:0004857
Trre8g00787 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 196 IPR035513 -
Trre8g00787 212 CDD PMEI-like_3 35 199 - -
Trre8g00787 212 Coils Coil 108 128 - -
Trre8g00787 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Trre8g00787 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Trre8g00787 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 197 IPR035513 -
Trre8g00787 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00787 Trre-Chr8 5611363 5612001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00787 26 193 Carbohydrate Esterase AT3G14310 25.581 4.42e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00787 - - gmx:100791798 301.597