Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00786 ATGAATCTTGATAAACTACGTGAATGGGCGTCTGATCAGAACATGATCAGAAAGACATGCAACCATTCATCATCCAATGTTGATTCTTCGTCATCATCTACTAATCATTTTGGTAGTAATCCTCATGCTCATGGAATTAGGAAAGCAATGAGGATTATTGAATCTCAGTTTGCTGCTTCTGATCTTCCGGATCTCCCTGGAGGCTCATCATCACACTCAGATGAGCCTCCAGCTCAGATAATCAATGTTGTTGCTACAGATGGTGATGAGTTTGGTGACGGTAACAACAACAGGAAGAAGAACAAGAAAAGTGCTAACAATGGAACAATCAGCAGCCTTCGAGGCCCAAAATATGGACCGTACAAATGTTCAGTTAAATCTTGTGACATGGTATTTACAACTTCACAAAAATTTGCTAACCACGTGAAGATGTGTCACCACAAGGGCGGAAAAAAACAGCAGATCACTCCGGCTGCTCCTCTCAACGGATAA 492 0.4167 MNLDKLREWASDQNMIRKTCNHSSSNVDSSSSSTNHFGSNPHAHGIRKAMRIIESQFAASDLPDLPGGSSSHSDEPPAQIINVVATDGDEFGDGNNNRKKNKKSANNGTISSLRGPKYGPYKCSVKSCDMVFTTSQKFANHVKMCHHKGGKKQQITPAAPLNG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00786 163 MobiDBLite consensus disorder prediction 20 40 - -
Trre8g00786 163 Gene3D Classic Zinc Finger 93 158 - -
Trre8g00786 163 MobiDBLite consensus disorder prediction 20 42 - -
Trre8g00786 163 MobiDBLite consensus disorder prediction 57 113 - -
Trre8g00786 163 ProSitePatterns Zinc finger C2H2 type domain signature. 123 147 IPR013087 -
Trre8g00786 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 152 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00786 Trre-Chr8 5606511 5607002 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre8g00786 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00786 - K24385 tpra:123922079 128.642