Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00785 ATGGCACAAAAACTCATTATCCCATCACTAATCATTTTTCTCTCACTCTTCTTAGAATCCTCCCTAGCCAAACATAACCCTCAAACAATAACCTACATAGAATCCTCTTGCAATGGTACCCTCTACCCTAAACTATGCATTCGTTGTCTTAACAAATTTTCCAAGTCAACCATAAATGGACCTCAACACTTAGCCCAAGTTGCCTTATCCGTGAGCCTCTCTAGAGCCCTACAAACAAGAGGGTACCTTTTGAATGTTGCTAAAGAACTCAAAGCAATTGATCATAAAAACAAAAGGATGTACCTAACCGTGCAAGATTGTGTGAATCAAATCAATGATAGTGTTGACCAACTTAGCCAAGCTATCAAAGAATTAAAAAGGTTGAACAATTTTAACACCATCATCAATGATAAAGTGTTGTGGCATATAAGTAATGTTGAGACATGGGTCAGCACGGCCTTGACCGATGCGAGTAGTTGTGTGCAATCGTTCCCCGGACATAGGATGAGCAAAAGGGTTGCAACGATTAAGATTAAGGCGAAGAATGTTGCGGAAGTTACTAGTAATGCACTTGCTTTGTTTCATAGTTATGCTTCTAGTTACAAGCAAGCAGCAGCTAGAGCTACCAAGAAGCCTTGA 639 0.3991 MAQKLIIPSLIIFLSLFLESSLAKHNPQTITYIESSCNGTLYPKLCIRCLNKFSKSTINGPQHLAQVALSVSLSRALQTRGYLLNVAKELKAIDHKNKRMYLTVQDCVNQINDSVDQLSQAIKELKRLNNFNTIINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRVATIKIKAKNVAEVTSNALALFHSYASSYKQAAARATKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00785 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 197 IPR035513 -
Trre8g00785 212 CDD PMEI-like_3 35 199 - -
Trre8g00785 212 FunFam Pectinesterase inhibitor 3 28 198 - -
Trre8g00785 212 Coils Coil 108 128 - -
Trre8g00785 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 193 - -
Trre8g00785 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Trre8g00785 212 NCBIfam pectinesterase inhibitor domain 6 197 IPR006501 GO:0004857
Trre8g00785 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Trre8g00785 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00785 Trre-Chr8 5598755 5599393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00785 26 193 Carbohydrate Esterase AT3G14310 25.581 3.43e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00785 - - gmx:100791798 297.36