Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00730 ATGACGAATCACGTTGAGTTCACACACGATGTTTTTCTAAGTTTCAGAGGTGGAACACGCTACTCCTTCACCGACCACCTCTTCCGTTCTCTTCTCCGTCACGGAATCAATGTTTTCAGAGACGATCAAAACCTCAACATCGGTGACGAAATCGGTCCTTCACTTCTACAAGCGATCGAAGCTTCTAGAATCTCGATCGTTGTTCTTTGTAAAGACTACGCTTCTTCCGGTTGGTGTCTTGACGAACTTGTTAAGATCGTTGACTGTTATGAAAATAACGGAAAATCGATTTTTGTTATATTTTATAAGGTTGAACCTTCAGATGTTAGACATCAGAGAAATAGTTATGAAATTGCTATGAATGAACATGAGAACAGATTTGGAAGTGAATCTGAGAAGGTGAAAGCATGGAGGTTCGCTTTGAATAGAGTCTGTGCTCTTAGTGGACTACATTTCCAGGAGGGTGTCTATGAATCTGAGTTTATTGAGAAGATTGTCCGAGACATCTCAGCTAAACTACCTCCCATGCCTTTACAAATTAAGCACCTAGTTGGACTCAATTCTCGTTTCGAACAGGTGAAGTCTTTTATTGATATTGATTCTGACGATGTTGTTTGCATGTTGGGAATTTGTGGAAGTGGTGGAATAGGCAAAACTACATTTGCCATGGATATATATAACAAGATCAGACATCGATTTGAAGCTGCAAGTTTTCTTGCTAATGTTAGAGAAAAATCAAATGCAAGCATTAGTGGCCTGGGAGATCTCCAAAAGACACTTCTGTCTGAAATGGGTGTGGAGACACATACCATGATGGGAAGCACATTTAGAGGAAGTTCTGAAATAAAACGCAGGCTATCCAACAAAAGAGTTCTTCTGGTACTGGATGATGTTGATTCAGTAAAACAATTGGACACTTTAGCCGGAGGACATGATTGGTTTGGTTCTGGTAGCAGAATCATCATAACAACAAGAGATGAAGATGTTTTACATAAGCATGATGTGAAAACATATAAACTCGAAGAGTTAAATTATCATGAATCCATTGAACTCTTTTGTTGGTATGCCTTTAATATGAGCGAACCTGCAGAAAACTTTAGAAATATCTCTTCCCGTGCAATAAATTATGCAAAGGGAATTCCATTGGCTTTAAGAGTAATAGGATCCAATTTGAAAGGTAAGTGCATAGAGGAATGGGATATTGAACTGCAGAAATATAAAAAGGTTCCAGATGCTGAAATTCAAGATGTACTAGAAATAAGCTACAAATGTCTATCTGACTTGGACCAGAAAATTTTTCTAGACATTGCTTGTTTTTTCAAAGGGGAAAGATGGGAGTATGTTAAAAGGATACTAGATGCATGTGGTTTCATCCCAGTTATACGAGTATTTGTCAGCAAATGTCTCATAACTGTTGATGAAAATGATTGTTTACAAATGCATGATTTAATACAAGCCATGGGTAGAGAGATTGTTCGGAAGGAATCACCATCAAACCCTGGTGAACGCAGCAGATTATGGTCATATAATGACGTTCTTGATGTACTGATAGGAAACTTGGGAACTAGTGCAGTTGAAGGCATAATGCTTGATCCCCCAAAACAAGAAAAAGTAGATCATTGGGATATTTCTGCCTTTGAGAATTTGAATAAACTCAGAATTTTGATTGTTAGGAAAACATTATTTTCATCAGGACCAAGTCATTTGCCGAATAGCTTACGGCTACTTGATTGGAAGTGCTACCCGTCAAATGATTTCCCGCCAAATTTTCATCCATACAATATTGTTGACTTCAAGTTACTTCATAGCTCTATGATATTGAAAACACCCTTTCAGATCTTTAAGGTATTAACATTCATCAATCTCTCTCATAGTCAATCCATAACTCAGATTCCTGATCTTTCTGGAGCTAAAACCTTAAAAGTGTTTACAGTTGATAAATGCCATAAATTGGTAAGATTTCATAAATCCATTGGTTTTATGCCTAATCTGGCGTTATTAAGTGCTTTGGGGTGCAAAGAGCTCAAATGTTTTGTGCCAAAAATGTATTTGCCCTCCCTTCAAGTGTTGTCATTTAATTTTTGCAAAAAATTTGAATACTTCCCACAAGTAATTCAAAAGATGGACATGCCATTACAGATTCACATGATAAACACCGCTATTAAGGAATTTCCAAAGTCTATTGATAACCTTACAGGGCTTGAGTATATAGACATGTCAACTTGCAAAGAGCTCAAAGATCTATCAAGTAGCTTCTTATTGCTTCCAAAACTGGTCACTTTAAAAATTGATGAATGCCCTCAATTGAGAACATCATTTCAAAGGTTTAAAGAGTGCCATTCAGAGGCAAATGGCTATCCAAATGTAGAAACACTTCATTTTGGCAGGGCTAATTTGTCATATGAGGTTGTTAATGCCATTATTGAAAAATTTCCAAAACTGGAACACTTGAAAGTTTCAAACAATCGGTTTGTAGCCCTCCCAAATTGCATCAGTGAATCTTTGCACTTAAAAAGTATTGATGTGAGTTTTTGTGAGAATCTTACAGAACTTCCATTAAATATTCAGAAAATAGATGCAAGAAACTGTCATTCCTTAACTCCAGAGGCATCAAATTTGCTTTGGTCTAAGGTTTCACAAGGGATACAAAGATTACAAATTGTGATGCCGATACCAAAAAAGGAGATCATTCCGAAATGGTTTGACTGTGTTTGCACTGAGGGAATTCCTCTTTTATGGGCTCGCTGGAAGTTTCCAGTTGTTGCTTTGGCATTGGTGTTCCGGGAGGTAAAAAGGCCAGATGGATTTTCTCGCTTGGTCCAATTTATAGATTTGTCGAATGAAATTTTTGACTGGCACAGTGCTAGCCTCCATTTGTTTATTAATGGTAGAGAAATTTGTGTCGGGGATTGCCGTTATTTCAATGTTCGGGCGGATCATGTGCTATTGTGTGATCTACGAGTTTTGTTTAGTGTTGAAGAGTGGCAGGACCTTGATGCAAGTCTTGGAGATGATTGGAAGGCCATTCAAGTTCAATATAATTCAGACTTGATTCTGACTAGTTGGGGAGTTTATGTATACAAGCAAGAAACAAGCATGGATGATATCAAATTCAGACGGCCCAATTGCAACTCCTTTCCCTGCATGCCGTCGTCATGTTTAGTTCCAAAGGGATCTCTAGAGCAGAAAATGAAACATTTTTGGGAAAATTTAGACCCAAGATGCTACTCTTCTGATATATTAGAATCAGAAAAAGGCTTAGACAGATGGGTTTCTAAAAATGCGTTATTGCAAGGTTGGATGAATGCCAAGGCTGATATTATGGTGGAGACTTCCTCCTCTGTCTACGGGTTAAGTCTAAAGCAAGACCATGAAGATTATGTAGATAATGAGAGTATAAAGGTATTAGAGATGGCTACAGAGATTAATATAGAGACTTTACCAAAAGTTATTGCAGAATCATTTCCTGAAAATATTCGTTTTCATAGCGCAATAATGGAAAGATTTGCTCTGGCAGGATCTGAATTTATGAACGGAAACAAGTTGAGCATAAAAATGGTCATTGTTCTAGAGTACTCTGATAGATGGGGAGCTATACACCGACGCTTTTGGGGAATCCTAGAGATAAAATGGGGGGATCCATTTTTCAAACCAGTATTGAAGAGGATGTGCCAAATTACGTGGGAAAAACTGGTAAGCAATGAACCGGAGGGTTCTTGTATTCTTGAATTGAAATGCCAGTGTCCGGTTAATGAGGAAACTTCAAGCTCTAGCCTTGAAGAAACCTCGGAGGAAGAAAACAACAATCCTGAATTGGAAGAGTTAATGAGGATGATAGAGCAAGATGTTATGAGCTTGAATAGATCTTATCTGAAAATGAAGGCATCTATTGCTCTAGCTAATAATGAGCCGATTTCTAGAAATCATCTAAATGAAGCCGGATTGTTAAAAGATTGGATTGTTTTTGGAAAATGGCCGATGGTTCCATCACCAGCCCTGATTAAGACCAGACCTTATGGGAAGATAAGAGTAGACGACGATCCTTTTCGCATTATGAGGAAATGCTTATGGTTTTTGGTCGCTGTTCTTGTTTTCCTTCCGGTCAGATGCCTGTCTAAACTAATCAGATGCCTATTTAGTGCAACGATAATAGGGCAGATTGCAAGGCTCTCTTTTTCGAATACACTACTATTAAATTTGGAGTCCTTATTGGAAGCTGACCTCTCAAAAAGACTGATTATTTCGGGAAGATGGACGATGTTTGCATCAGCTATAGTAGTCCTTATTGGAAGCCGACCTCTTCTTAAGATCACACCTAATGGAATAAAATTCTTTGGTTTGAGCTTTTTCCTTTTTGTTCTAATCAGATGTCTGTTTTTTGTGTGCCTTCAATTCTGTAGTGTAACATTAACAGGCATGGCTTTAAGGCGCTTTTTGTTGTATTTTCTACTAAACTATGTTGAGTCCTTAAAGTCCATTATTAGGTACATTACAGTCTATTTAAAGACACTACTCTACTGCAACTTTGAAATAATATTTTGA 4542 0.3767 MTNHVEFTHDVFLSFRGGTRYSFTDHLFRSLLRHGINVFRDDQNLNIGDEIGPSLLQAIEASRISIVVLCKDYASSGWCLDELVKIVDCYENNGKSIFVIFYKVEPSDVRHQRNSYEIAMNEHENRFGSESEKVKAWRFALNRVCALSGLHFQEGVYESEFIEKIVRDISAKLPPMPLQIKHLVGLNSRFEQVKSFIDIDSDDVVCMLGICGSGGIGKTTFAMDIYNKIRHRFEAASFLANVREKSNASISGLGDLQKTLLSEMGVETHTMMGSTFRGSSEIKRRLSNKRVLLVLDDVDSVKQLDTLAGGHDWFGSGSRIIITTRDEDVLHKHDVKTYKLEELNYHESIELFCWYAFNMSEPAENFRNISSRAINYAKGIPLALRVIGSNLKGKCIEEWDIELQKYKKVPDAEIQDVLEISYKCLSDLDQKIFLDIACFFKGERWEYVKRILDACGFIPVIRVFVSKCLITVDENDCLQMHDLIQAMGREIVRKESPSNPGERSRLWSYNDVLDVLIGNLGTSAVEGIMLDPPKQEKVDHWDISAFENLNKLRILIVRKTLFSSGPSHLPNSLRLLDWKCYPSNDFPPNFHPYNIVDFKLLHSSMILKTPFQIFKVLTFINLSHSQSITQIPDLSGAKTLKVFTVDKCHKLVRFHKSIGFMPNLALLSALGCKELKCFVPKMYLPSLQVLSFNFCKKFEYFPQVIQKMDMPLQIHMINTAIKEFPKSIDNLTGLEYIDMSTCKELKDLSSSFLLLPKLVTLKIDECPQLRTSFQRFKECHSEANGYPNVETLHFGRANLSYEVVNAIIEKFPKLEHLKVSNNRFVALPNCISESLHLKSIDVSFCENLTELPLNIQKIDARNCHSLTPEASNLLWSKVSQGIQRLQIVMPIPKKEIIPKWFDCVCTEGIPLLWARWKFPVVALALVFREVKRPDGFSRLVQFIDLSNEIFDWHSASLHLFINGREICVGDCRYFNVRADHVLLCDLRVLFSVEEWQDLDASLGDDWKAIQVQYNSDLILTSWGVYVYKQETSMDDIKFRRPNCNSFPCMPSSCLVPKGSLEQKMKHFWENLDPRCYSSDILESEKGLDRWVSKNALLQGWMNAKADIMVETSSSVYGLSLKQDHEDYVDNESIKVLEMATEINIETLPKVIAESFPENIRFHSAIMERFALAGSEFMNGNKLSIKMVIVLEYSDRWGAIHRRFWGILEIKWGDPFFKPVLKRMCQITWEKLVSNEPEGSCILELKCQCPVNEETSSSSLEETSEEENNNPELEELMRMIEQDVMSLNRSYLKMKASIALANNEPISRNHLNEAGLLKDWIVFGKWPMVPSPALIKTRPYGKIRVDDDPFRIMRKCLWFLVAVLVFLPVRCLSKLIRCLFSATIIGQIARLSFSNTLLLNLESLLEADLSKRLIISGRWTMFASAIVVLIGSRPLLKITPNGIKFFGLSFFLFVLIRCLFFVCLQFCSVTLTGMALRRFLLYFLLNYVESLKSIIRYITVYLKTLLYCNFEIIF 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00730 1513 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 749 IPR044974 GO:0006952
Trre8g00730 1513 Pfam NB-ARC domain 191 405 IPR002182 GO:0043531
Trre8g00730 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 436 IPR027417 -
Trre8g00730 1513 PRINTS Disease resistance protein signature 377 391 - -
Trre8g00730 1513 PRINTS Disease resistance protein signature 207 222 - -
Trre8g00730 1513 PRINTS Disease resistance protein signature 285 299 - -
Trre8g00730 1513 PRINTS Disease resistance protein signature 729 745 - -
Trre8g00730 1513 SMART till_3 8 147 IPR000157 GO:0007165
Trre8g00730 1513 SUPERFAMILY L domain-like 479 880 - -
Trre8g00730 1513 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 149 IPR035897 -
Trre8g00730 1513 Gene3D - 7 172 IPR035897 -
Trre8g00730 1513 Gene3D Ribonuclease Inhibitor 539 714 IPR032675 -
Trre8g00730 1513 Gene3D Ribonuclease Inhibitor 715 886 IPR032675 -
Trre8g00730 1513 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Trre8g00730 1513 Gene3D - 173 341 IPR027417 -
Trre8g00730 1513 Gene3D - 342 426 IPR042197 -
Trre8g00730 1513 Pfam TIR domain 9 181 IPR000157 GO:0007165
Trre8g00730 1513 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00730 Trre-Chr8 5224151 5230299 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00730 23 778 WRKY Transcription Factor Family AT4G12020 31.620 8.77e-85 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00730 - - cam:101493067 1688.32