Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00727 ATGGGTAGAGAGATTGTTCGAAAGGAATCAGCATCAAACCCTGGTGAGCGTAGCAGATTATGGTCTCATAAAGATGTTCTTAATGTACTGCAAGGAAACTTGGGAAGTACTTCAATTGAAGGAATAATACTTCATCCCCCGAAACGTGAGAAAGTAGATCAATGGGCTTGGTGCACTGATCTCAAAAGTTTTGTGCCAAAAATGTATTTGCCGTCCCTTCAAGAGCTTTCATTTAATTTCTGCAAAAAATTTGAACACCTCCCACAAGTAATGCAAAAGATGAAAACGCCATTAAAGGTTAACATGATAAGTACTACCATTGAAGAGTTTCCAAAGTCTGTTGGTAACCTTACAGGCCTTGAGTATATAGACATGTCAAATTGTAAAGGGCTTAAAGATCTACCAAGTAGCTTCTTGTTGCTACCAAAACTGCTCACTGTAAAAATTGATGGATGCACTCAACTTGGAGAATCATTTCAAAGGTTCAAAGAGTGGCATTCAGTGGCCAACGGGTATCCAAATATAGAAGCACTTCATTTTAGCGAGGCTAATTTATCATATGAAGATGTTAATGCCATTATTGAAAAATTTCCAAAACTGAAAGGCTTGAAAGTTTCGCACAATGGGTTTGTAGCCATCCCAAATTGCATCGGAGGATCAATGCACTTGAAAAGTCTTGATGTGAGCTTTTGCATGAATCTTACAGAAGTTCCAGAACTTCCATCAAGTATTCACAAAATAGATGCAAGACACTGTGAATCCTTAACCTTGGAGGCATCAAGTTTACTTTGGACCAAGGTTTCACAAGATATCCAAGGAGTACAAGTTGTGATGCCAATGCTGAAAAGGAAAATTCCAGAATGGTTTCACTGTGTTGGCACTCATGAGATTCCGCTTTTATGGGCTCGTCGGAAGTTTCCCGCTGCCGCTTTAGCGCTTGTGTTCGGGGAAGTAAAAAGGGCCGATAATATTTCTGAATTTGTTGATGATATAAAATTGTTGAGTGGAGCCAAAGACTGGAGCACTGTTAGCCTCCATTTGTTTATTGATGGCCAAGAAATTTGTAGCAAGGATTGCCGTTATTTTAATGTTGGGGAAGACCATGTGCTACTTTGTGATCTACGAGTTTTGTTCAATGATGAAGAGTGGCAGGAACTTGATGCAAGTCTTGGAAATGAATGGAAGGCCATTCAGGTTCAATATGATTCGGACTTGATTCTGACTAATTGGGGAGTTTATGTGTACAAGCAAGAAAAAGGCATGGATGATGTTCAATTCAAAACTCCTAATCGCAATTTCTTTTCCTACATTCCATCGTCACATTTGGTTCCAAAGAGATATCCAGACCTGCAAATAAAACATGTGCTGGAAAGTTTTAATCCAAGAGACTTGTTTGATGATTTTATGCCTCAAATAGAATCAGAAGAGGGTCCATTCTTGTCCTTAAACGTGCTTTTGCGGTCTTTGAGGAATGCCAGGGATGAAGTTATAGAAAAAACTTCTTCCTCTGTGTATGGTGCAAGTGTAAAGCAAGACCATCAAGATTCTGTAGAGGATGTGATTCAAGTATCAGAGATGCTAAACGAGAGTTTTTCAGAACATTTTGCTGATTCATCTCCTGATGATCTTCAAATTGCAGGCGGAGTTGCAGAAAGAATGTTGAGGGCACGGGTAGAGTTATTGAAAGAAAATTGCATGGACATTGGTATGCCTATTATTTTAGAGTATACTGATACGTTGGGAGCTACAAATCGACGCTTTTGGGGAACCATGGAGGTAAAATTGGGAGATCCATTTTACAAACCAGTGATGAAGAGGATAATCCAACTTTCCTTCGACCGTTCGATGGCTGACTCGAGGGAAACCTTTGTTGAATTGATATGCCAACCTGCAGGTGAAGAGGAAGCTTCAAGCGCTCTCCTAGAAGAATCCTTGGAAGGAAACTACAATCCTGAGTTGGAAGAGTTGATGAGAATGATAGAGCAAAATGCTATGAGCTTTAACAAATCTTATGGGAAAATGAAGGCATCTATTGTTCAAACTGATGATCCATTTTCTAAAAATTATCAGTTGGAATCATTAATCTTAGGAAGACTTATGATGTTAGGAAAATTGACAATGTTTGGATCAGTGGCCAAGTTCAAGATCACACCTTACGGAAAGATGAGAACTGAGGACGGACCTTTCCGCTTTCTGAGGATATGTTTATGGGGTTTGATTTTGGTTCTTCTTAGCCTAATTATACTGTCATTTCATTTCATTGTACCTGGCCTGGTAGCATCCACGGAATTCAATGGACAAAGGCCAGCCATCTTTCTTTCATGGTAA 2328 0.3948 MGREIVRKESASNPGERSRLWSHKDVLNVLQGNLGSTSIEGIILHPPKREKVDQWAWCTDLKSFVPKMYLPSLQELSFNFCKKFEHLPQVMQKMKTPLKVNMISTTIEEFPKSVGNLTGLEYIDMSNCKGLKDLPSSFLLLPKLLTVKIDGCTQLGESFQRFKEWHSVANGYPNIEALHFSEANLSYEDVNAIIEKFPKLKGLKVSHNGFVAIPNCIGGSMHLKSLDVSFCMNLTEVPELPSSIHKIDARHCESLTLEASSLLWTKVSQDIQGVQVVMPMLKRKIPEWFHCVGTHEIPLLWARRKFPAAALALVFGEVKRADNISEFVDDIKLLSGAKDWSTVSLHLFIDGQEICSKDCRYFNVGEDHVLLCDLRVLFNDEEWQELDASLGNEWKAIQVQYDSDLILTNWGVYVYKQEKGMDDVQFKTPNRNFFSYIPSSHLVPKRYPDLQIKHVLESFNPRDLFDDFMPQIESEEGPFLSLNVLLRSLRNARDEVIEKTSSSVYGASVKQDHQDSVEDVIQVSEMLNESFSEHFADSSPDDLQIAGGVAERMLRARVELLKENCMDIGMPIILEYTDTLGATNRRFWGTMEVKLGDPFYKPVMKRIIQLSFDRSMADSRETFVELICQPAGEEEASSALLEESLEGNYNPELEELMRMIEQNAMSFNKSYGKMKASIVQTDDPFSKNYQLESLILGRLMMLGKLTMFGSVAKFKITPYGKMRTEDGPFRFLRICLWGLILVLLSLIILSFHFIVPGLVASTEFNGQRPAIFLSW 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00727 775 Gene3D Ribonuclease Inhibitor 55 290 IPR032675 -
Trre8g00727 775 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 61 156 - -
Trre8g00727 775 SUPERFAMILY RNI-like 69 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00727 Trre-Chr8 5196839 5199919 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00727 2 259 WRKY Transcription Factor Family AT4G12020 26.752 9.47e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00727 - - vum:124827448 831.247