Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00725 ATGAAAAATCCCTTTCAGATTTTTGAGGATTTAACATTCATCAATCTCTCCTATAGTCCATCCATAACTCAAATTCCTGATTTGTCTGGAGCTAATAACTTAAGAGTGTTTACACTTGACAAATGTCATAAACTCGTAAGGTTTGATATATCCGTTGGATTTATGCCTAATCTGGTGTATTTAAGTGCTTCAGGGTGCACTGAGCTCAAAAGTTTTGTGCCAAAGATGTATTTGCCCTCCCTTCAAGTGCTTTCATTTAATTACTGCGAAAGGTTTGAACACTTCCCACATGTAACGAAAAAGATGGATAAGCCGTTAAAGATTTACATGATAAACACCGCCATTAAGGAGTTTCCAAAGTCTATTGGTAATCTTACAGGCCTTGATTATATAGACATGTCAATTTGTAAAGGGCTTAAAGATCTATCAAGTAGCTTCTTATTGCTTCCAAAACTGGTTACTTTGAAAATTGATGGCTGCTCTCGACTTGGAGAATCATTTCAACGGTTCAAAGAGAGCCATTCAGTGGCAAACAACTATCCAAATTTAGAAGCACTTCATTTTAGCGAGGCTAATCTATCATATGAAGATGTTAATGCCATTATTGAAACATTTCCAAAACTGAAAGACTTGAAAGTATCGCACAATGGGTTTGTAGCTCTCCCAAATTGCATTAGAAGATCTATGCACTTAAAAAGTCTTGATGTGAGCTTTTGCAGGAATCTTACAGAAGTTCCGGAACTTCCATTAAGTATTCAGAAAATAGATGCAAGACATTGTCAATCCTTAACATTAGAGGCATCAAATGTGCTCTGGTCCAAGGTTTCACAAGAGGTCCAAAGAATACAAGTTATGATGCCAATGCCAAAAAGGGAGATTCCAGAATGGTTTGACTGCGTTTGCACTCAAGAGGTTCCGATTTTATGGGCTCGCCGGAAGTTTCCCATTGTTGCTTTAGCATTAGTGTTTCAGGAAGTAAAAAATACAGATGATGTTTCTAAATTTGTTGATGCTATAAAGTTATTGAATGGAATCAAGGGCTGGCACACTGTTAGCCTCCATTTGTTTATTGATGGTCAAGAAATTTGTAGCAAGAATTGCCATTATTTTAATGTTGGGGGAGATCATGTGCTATTGTGTGATCTACGTGTTTTGTTCAGCGATGAAGAGTGGCAGGACATTGATGCAAGTCTTGGAGGTGACTGGAAGGCCATTCGGGTTCAATATAATTCAGACTTGGTTCTGACTAAGTGGGGAGTTCATGTGTACAAGCAAGAGACAGGCATGGATGATATCCAATTCATACCTCCCAATTGTAACTCATTTTCCTACATGTCATCGTCATCTTTAGTTCCAAAGGGATCTCCACAGCAAAAAATGAAACATATCCTAGAAAGTTTCAATCCAAGAGATATTTTTAATGACTGTTTGCCTTTAGTAGAATCAGAAGAAGTTGAAGTCAGGTCTTTAAAAGTGGTATTGCGGTCTTTGAGGAATGCCAAGGCTGAAATTATAGAGCAGACTTCCTCCTCTACATATGGGGCAAGTGTAAAGCAAGACAATGAAGATTCTGTAGAGGATGTGGTTCAGGTATTAGATATGATAAAAGAGAATCTTTCAGAAAAGTTTGCTGATTCATCTCCAGAAGATCTTCAAATTGCAGTCGGAGTTGTGGAAAGGATATTGAGGGCACGGGTAGAATTAATGAAGGAAGATAGCATGACCACTGGTATGCCTATTATTCTAGAGTATAATGATACGTCGGGCGCTACAAATAGACGCTTTTGGGGAACTGTGGAGATAAAATTGGGAGATCCATTTTATAGACCATTGTTGAAGTGGCAAAACCAACTTTCTTGGGGACTTGGGACGTCGGACCTGAGGATAATCATTGTTGAATTGAAATGCCAGCCTGAAGATGAAGAGGAAACTTCAAGTTCTCGCCTTGAAGAATCCTTGGAGGAAGGAAACTACAATCCTGAATTGGAAGAGTTGATGAAGATGATAGAGCAAGATGCTATGAGATTCAATAAAACTTACGGGAAAATGAAGGCGTCTATTGTTCAAGCTGATGAGTCATTTTCTGATAACTATATTTTGGAAGCATTACTCCTCAAAAGACTAATAAGTTTAGGAAAATTGACAATGTTTGGATCAGTAATCAAGTTCATGATCACACCTTATGGCAAGATGAGGGTCGAAGACGAACCTTTCCGCATTTTGAGGACATTTTTCTGGGGATACCAATAA 2250 0.3827 MKNPFQIFEDLTFINLSYSPSITQIPDLSGANNLRVFTLDKCHKLVRFDISVGFMPNLVYLSASGCTELKSFVPKMYLPSLQVLSFNYCERFEHFPHVTKKMDKPLKIYMINTAIKEFPKSIGNLTGLDYIDMSICKGLKDLSSSFLLLPKLVTLKIDGCSRLGESFQRFKESHSVANNYPNLEALHFSEANLSYEDVNAIIETFPKLKDLKVSHNGFVALPNCIRRSMHLKSLDVSFCRNLTEVPELPLSIQKIDARHCQSLTLEASNVLWSKVSQEVQRIQVMMPMPKREIPEWFDCVCTQEVPILWARRKFPIVALALVFQEVKNTDDVSKFVDAIKLLNGIKGWHTVSLHLFIDGQEICSKNCHYFNVGGDHVLLCDLRVLFSDEEWQDIDASLGGDWKAIRVQYNSDLVLTKWGVHVYKQETGMDDIQFIPPNCNSFSYMSSSSLVPKGSPQQKMKHILESFNPRDIFNDCLPLVESEEVEVRSLKVVLRSLRNAKAEIIEQTSSSTYGASVKQDNEDSVEDVVQVLDMIKENLSEKFADSSPEDLQIAVGVVERILRARVELMKEDSMTTGMPIILEYNDTSGATNRRFWGTVEIKLGDPFYRPLLKWQNQLSWGLGTSDLRIIIVELKCQPEDEEETSSSRLEESLEEGNYNPELEELMKMIEQDAMRFNKTYGKMKASIVQADESFSDNYILEALLLKRLISLGKLTMFGSVIKFMITPYGKMRVEDEPFRILRTFFWGYQ 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00725 749 Coils Coil 480 500 - -
Trre8g00725 749 SUPERFAMILY L domain-like 5 264 - -
Trre8g00725 749 Gene3D Ribonuclease Inhibitor 2 107 IPR032675 -
Trre8g00725 749 Gene3D Ribonuclease Inhibitor 108 281 IPR032675 -
Trre8g00725 749 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 8 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00725 Trre-Chr8 5189403 5191998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00725 8 173 WRKY Transcription Factor Family AT4G12020 34.940 1.45e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00725 - - vum:124827448 976.081