Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00721 ATGAATCTTGCTTTAAGCATTGTTTACATTGCAGCGGGAGTTTTTGTTGATGGTTGGATTGGCATAGCAGATGCAATCCACAACCATGGAAAACCAATGACTCTCACTGAATTAGCTTCATCTTTGAAACTCCACCCTTATAAAGTTAATGTCCTCTATCGACTCATGCGCGTGCTAACACACAATGGTTTCTTCACAAAAACAACGGCGAAAGAAGAAACAATCTATGCTCTCACACCTCCATCAAAGCTTCTCATCCGAGGCAAACCGATGTGTTTAGCATCCCTTACAGGCGGTCATCCACGTACAACGAACATGTGGAACTTCACCAAGAAATGGTTAACTGAGGACAAGGAACTCAGCCTATTTGAGAGTGCAAATGGGGAGACGTTTTGGGATATGCTGAACAAAGATTCTGAATCTGATAACTTGAGTTTTTTTCAAGAGGCTATGGAAGCTGATTCTCAAATGTTTAAGCTTGCACTCAAAGATTGCAAGCATGTGTTTGAAGGATTGGAGACTTTGGTTGATGTGGGAGGTGGGACTGGAGTTGTGGCAAAACTCATTCATGAAGTACTTCCTGATATTAAATGCACTGTTTTGGATCAACCACAAGTTGTTGGTAATTTAACTGGAAACAAAAATTTGAACTTCGTTGGTGGAGATATGTTCAAATTTGAACTTTGTACAATGGAAAAGAAAGAGAGAAAAAAGAATGGGAGAAACTCATATATGATGCAGGCTTCAGCAGCTACAAGATTACTCCCATATGGGGTTTCAAGTCACTCATTGAAGTTTATCCTTAGTTTGGATTTATGCTACAAGTTCAATAAGTTAGATTTGTAA 846 0.3936 MNLALSIVYIAAGVFVDGWIGIADAIHNHGKPMTLTELASSLKLHPYKVNVLYRLMRVLTHNGFFTKTTAKEETIYALTPPSKLLIRGKPMCLASLTGGHPRTTNMWNFTKKWLTEDKELSLFESANGETFWDMLNKDSESDNLSFFQEAMEADSQMFKLALKDCKHVFEGLETLVDVGGGTGVVAKLIHEVLPDIKCTVLDQPQVVGNLTGNKNLNFVGGDMFKFELCTMEKKERKKNGRNSYMMQASAATRLLPYGVSSHSLKFILSLDLCYKFNKLDL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00721 281 PANTHER O-METHYLTRANSFERASE 20 225 IPR016461 GO:0008168
Trre8g00721 281 SUPERFAMILY "Winged helix" DNA-binding domain 20 89 IPR036390 -
Trre8g00721 281 Pfam Dimerisation domain 21 60 IPR012967 GO:0046983
Trre8g00721 281 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 2 281 IPR016461 GO:0008168
Trre8g00721 281 Gene3D Vaccinia Virus protein VP39 90 233 IPR029063 -
Trre8g00721 281 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 227 IPR029063 -
Trre8g00721 281 Gene3D - 19 85 IPR036388 -
Trre8g00721 281 Pfam O-methyltransferase domain 108 227 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00721 Trre-Chr8 5127541 5131269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00721 20 244 Monolignol Biosynthesis Gene Families AT3G53140 29.317 1.65e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00721 K22588 - tpra:123920923 350.903