Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00715 ATGGGTGCATTTCAATTTCTACTTGCTTCAACCAACAAAAGGGGCCTTCTTTATCACCATCCTTTAGCATCAGACCAAATTCAACGGCTGAAACAGTCTCTAACCTCTGCACTTACCTTTTTCCAACCTCTTGCCGGCCGTCTTAGAATAACGGAACACAGAGACAACACCGTCTCGTGTTCCTTAACATGCAATAATGCAGGCATAACCTTTATCCATGCCGCATCAAAGAATACTCGTGTAGCGGACATCCTAGAACCCACCTGCGTTCCTTCAGTTGTCCGTTCGTTTTTTCCTTTTATAGGAGTTAGAAACTACGAAGGCACATCAAAACCATTATTAGCGGTTCAAGTTACGGAGTTAGTTGATGGTATCTTCATTGGTTGCACGTTCAACCATGTGGTTGGTGATGGAAACTCCACATGGAATTTCATTAATTCTTGGGCTGAAATCTCACGTGGTTGTTCTCATCATCGAATATCTAAACCTCCAATACTAGAACGTTGGTTTCCAAATGATATTCAACGGCCCATACGATTTCCTTTCACTATGGAGCCACAAAATCATTCTGATAGGTTGAGTTTTTCGTCATTTGACGAAAAACTCAATCTGTCAGAAAGAATATTTCGCTTCACAAAGGAAAAAATTGAGCAACTGAAATCAAAAGTCAACGCAGAGATTAATGATACCATAAAAGTTTCTTCCCTACAAGCGGTTTTAACTCACCTTTGGCGCTCTGTGATCCGTTCTAAACATCTTGATCCACAAGAAGACGTCTACAATATGTTCGTGATAGGAGTTAGACAAAGGTTTGATCCACAATTGCCAGAAGATTATTTTGGAAACGCGATTATAGGTTGTGGGGTTAAAATGAAAGTTGGGGATTTATTGAAAGAAGGTGGGCTTGGTAAAGGTGCTTCGGAGATGAACAAGTTAATTGCTTCACACTCTAATGAGAAATTAAAAAATCAATTTGAATCTTGGTTGAGAAATCCAAGCTTTATTACATCTGCTAGCATGATCAATAAAGATTTCTTGGCCACTACCAGCTCTCCATGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCTGTGGCAGTTCGTAGTGGCAATAACATAAATGGATTTGTTAGTGCATTTTCAGGAATAGAAGAAGGTAGTATCAATCTTCAAGTGTGTCTTCCTTACAAAATTTTGGAGGCCATGGGAAATGACCATGAGTTTATGGAGGTTGTGTCCAACTAG 1251 0.3973 MGAFQFLLASTNKRGLLYHHPLASDQIQRLKQSLTSALTFFQPLAGRLRITEHRDNTVSCSLTCNNAGITFIHAASKNTRVADILEPTCVPSVVRSFFPFIGVRNYEGTSKPLLAVQVTELVDGIFIGCTFNHVVGDGNSTWNFINSWAEISRGCSHHRISKPPILERWFPNDIQRPIRFPFTMEPQNHSDRLSFSSFDEKLNLSERIFRFTKEKIEQLKSKVNAEINDTIKVSSLQAVLTHLWRSVIRSKHLDPQEDVYNMFVIGVRQRFDPQLPEDYFGNAIIGCGVKMKVGDLLKEGGLGKGASEMNKLIASHSNEKLKNQFESWLRNPSFITSASMINKDFLATTSSPWFDVYGNDFGWGKPVAVRSGNNINGFVSAFSGIEEGSINLQVCLPYKILEAMGNDHEFMEVVSN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00715 416 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 412 - -
Trre8g00715 416 Gene3D - 5 179 IPR023213 -
Trre8g00715 416 Pfam Transferase family 22 411 - -
Trre8g00715 416 Gene3D - 202 408 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00715 Trre-Chr8 5097694 5099024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00715 28 373 Monolignol Biosynthesis Gene Families AT5G48930 27.548 5.22e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00715 - - gmx:100500257 445.277