Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00686 ATGGGAAGGCAGAAGCATTCTGATTCAAATTGTAACAATCATGATCCTAAGAGTAAAAGCCTATTTCATATTATTAAGCACCATCCCTTATGTCATCATTTCATACAAAAAAGACATGCATACAAGAAGGATGGTGAGGAAAGAAATGATGCAGGAACTTTACTTGAACAAAGGGATGAGGCCTTTTCTTGTGACAATGGGAAGAACCTAAGCCTTGCCAAGTTAAGAAAATCAAATGTTGAAGAAAAGGTGACACCACACTCTTCAGTTGGAAAAAGATGTGTACAATGTATTGATGCTACATCTAGAAGTGATTACCGGGAATGTAACTTGTGTTGCAAGCTTCACCGACCAACAAAAAATGACTTACTTGCGCGAAAAGTAATAGATAAAAAGAGTTATAGAGTGGAAAGTAATGCAAGGAAACACATATTTGGTATTTATACTCATTTATGCAAGCATTTTGTTGGTGGCTTGGAAACCACCAACAAGAACAAGGAAATATTATTAACATTTCTTCATGATCCTGTCTTTCCTATGGTCTATCGCTTCCATAAACAACATGTGCAAAGACGAAAAATGAAACTAAATAGGTCGGAGTCATCTCCTTTTCCTTACTCATCGTCGAAACCAAAATGGAATGGAAGATTATATTGTGACAATATAATACAAAAGTCGGCTCGGCTTGAGCCCTCAAAAACAGCTTATGAACAGGTCATGCCATCGGTAACAAAAGAGAAAGTAAATGGAAATTTCAATATGAGTGAAGGAGTTATAATAGTAAGAAATGTTAAATTTTCTTCGGTATGTACGAAGGGTCAAAATAATCTCAAACAAAAAATAGAGAATGTAACTGGAGAAAGCGAAAAAGAAAAGATTCGCGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAGGGATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTATTACAAGAGAAGTTCGATACAAGAACTCAGTAAGAAGAATCATGTCTCTTCAAGAACCATTAGTAAGTTATTGTCAACAACAAGAGACGCATTCGCCGTTGAGAATGTTGGTACCTTCTCAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAATGGAGATATTTCTGATTTGAATCAAGAAAATCTTGTCATTATAGATGAAAATGATTTGGTGATTAGTAATAATATGAAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGGTGGATTTAATAATTGATGATTTTGAACATAGTAGTTTGAGAAATTGTGGAAATTTCAGTGACCAAGATATTGCTGCAAATAAAGAATACAAGGCTGCCATAGCAGCATCAGGTATGTTGACAACCTGTGAAGCACTGACACAGACACCGGATAATGTGGCTTCAAAAATGGAGATTCTAAGCAAGAAATTGAACCATGAAATTTCACATATTGATGTGGACACAAAGTACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTCACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGACACTCCAGTTGATCCATCACTATATGAAGAAATGGAAAATGATCCTGATTTTTGTGCTAATAAAGGTGATCAATGTAATCACCATGTATTGTTTGATTTAATTAATGAGACAATGTTGGAAATTTATGGAAGGTCACATTGTTACCCTCCTATAGGGTGTCACATTCTCCATAATGTTTGGACTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATAGATGATCATATAACTAGAGATTTATCAAAAAGTGATGGTTGGTTCAATGTTAAGTTGTATGGTGAAGATGTTGGTTTAGAGGTGGAAGACATGATTTTTCATGACCTATTGGTGGAAATAATGTGGGATTTGGCTTGTTTATGA 1959 0.3446 MGRQKHSDSNCNNHDPKSKSLFHIIKHHPLCHHFIQKRHAYKKDGEERNDAGTLLEQRDEAFSCDNGKNLSLAKLRKSNVEEKVTPHSSVGKRCVQCIDATSRSDYRECNLCCKLHRPTKNDLLARKVIDKKSYRVESNARKHIFGIYTHLCKHFVGGLETTNKNKEILLTFLHDPVFPMVYRFHKQHVQRRKMKLNRSESSPFPYSSSKPKWNGRLYCDNIIQKSARLEPSKTAYEQVMPSVTKEKVNGNFNMSEGVIIVRNVKFSSVCTKGQNNLKQKIENVTGESEKEKIRVGMDSVIHKLPQGQGISDKLKEEILKKLTEPIITREVRYKNSVRRIMSLQEPLVSYCQQQETHSPLRMLVPSQRILSLPDLQSFSYASMNGDISDLNQENLVIIDENDLVISNNMKSGSDCINKINGKVDLIIDDFEHSSLRNCGNFSDQDIAANKEYKAAIAASGMLTTCEALTQTPDNVASKMEILSKKLNHEISHIDVDTKYKDEFNYVKYVLEISGLTSNESISAWHSKDTPVDPSLYEEMENDPDFCANKGDQCNHHVLFDLINETMLEIYGRSHCYPPIGCHILHNVWTHMSKSLCLRSKVGQKIDDHITRDLSKSDGWFNVKLYGEDVGLEVEDMIFHDLLVEIMWDLACL 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00686 652 Pfam Domain of unknown function (DUF4378) 502 644 IPR025486 -
Trre8g00686 652 PANTHER PROTEIN TRM32 455 649 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00686 Trre-Chr8 4896101 4898879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00686 156 638 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.717 7.17e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00686 - - mtr:25491599 852.432