Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00685 ATGGGAAGGCAGAAGCATTCTGATTCAAATTGTAACAATCATGATCCTAAGAGTAAAAGCCTATTTCATATTATTAAGCACCATCCCTTATGTCATCATTTCATACAAAAAAGACATGCATACAAGAAGGATGGTGAGGAAAGAAATGATGCAGGAACTTTACTTGAACAAAGGGATGAGGCCTTTTCTTGTGACAATGGGAAGAACCTAAGCCTTGCCAAGTTAAGAAAATCAAATGTTGAAGAAAAGGTGACACCACACTCTTCAGTTGGAAAAAGATGTGTACAATGTATTGATGCTACATCTAGAAGTGATTACCGGGAATGTAACTTGTGTTGCAAGCTTCACCGACCAACAAAAAATGACTTACTTGCGCGAAAAGTAATAGATAAAAAGAGTTATAGAGTGGAAAGTAATGCAAGGAAACACATATTTGGTATTTATACTCATTTATGCAAGCATTTTGTTGGTGGCTTGGAAACCACCAACAAGAACAAGGAAATATTATTAACATTTCTTCATGATCCTGTCTTTCCTATGGTCTATCGCTTCCATAAACAACATGTGCAAAGACGAAAAATGAAACTAAATAGGTCGGAGTCATCTCCTTTTCCTTACTCATCGTCGAAACCAAAATGGAATGGAAGATTATATTGTGACAATATAATACAAAAGTCGGCTCGGCTTGAGCCCTCAAAAACAGCTTATGAACAGGTCATGCCATCGGTAACAAAAGAGAAAGTAAATGGAAATTTCAATATGAGTGAAGGAGTTATAATAGTAAGAAATGTTAAATTTTCTTCGGTATGTACGAAGGGTCAAAATAATCTCAAACAAAAAATAGAGAATGTAACTGGAGAAAGCGAAAAAGAAAAGATTCGCGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAGGGATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTATTACAAGAGAAGTTCGATACAAGAACTCAGTAAGAAGAATCATGTCTCTTCAAGAACCATTAGTAAGTTATTGTCAACAACAAGAGACGCATTCGCCGTTGAGAATGTTGGTACCTTCTCAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAATGGAGATATTTCTGATTTGAATCAAGAAAATCTTGTCATTATAGATGAAAATGATTTGGTGATTAGTAATAATATGAAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGGTGGATTTAATAATTGATGATTTTGAACATAGTAGTTTGAGAAATTGTGGAAATTTCAGTGACCAAGATATTGCTGCAAATAAAGAATACAAGGCTGCCATAGCAGCATCAGGTATGTTGACAACCTGTGAAGCACTGACACAGACACCGGATAATGTGGCTTCAAAAATGGAGATTCTAAGCAAGAAATTGAACCATGAAATTTCACATATTGATGTGGACACAAAGTACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTCACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGACACTCCAGTTGATCCATCACTATATGAAGAAATGGAAAATGATCCTGATTTTTGTGCTAATAAAGGGTGTCACATTCTCCATAATGTTTGGACTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATAGATGATCATATAACTAGAGATTTATCAAAAAGTGATGGTTGGTTCAATGTTAAGTTGTATGGTGAAGATGTTGGTTTAGAGGTGGAAGACATGATTTTTCATGACCTATTGGTGGAAATAATGTGGGATTTGGCTTGTTTATGA 1869 0.3456 MGRQKHSDSNCNNHDPKSKSLFHIIKHHPLCHHFIQKRHAYKKDGEERNDAGTLLEQRDEAFSCDNGKNLSLAKLRKSNVEEKVTPHSSVGKRCVQCIDATSRSDYRECNLCCKLHRPTKNDLLARKVIDKKSYRVESNARKHIFGIYTHLCKHFVGGLETTNKNKEILLTFLHDPVFPMVYRFHKQHVQRRKMKLNRSESSPFPYSSSKPKWNGRLYCDNIIQKSARLEPSKTAYEQVMPSVTKEKVNGNFNMSEGVIIVRNVKFSSVCTKGQNNLKQKIENVTGESEKEKIRVGMDSVIHKLPQGQGISDKLKEEILKKLTEPIITREVRYKNSVRRIMSLQEPLVSYCQQQETHSPLRMLVPSQRILSLPDLQSFSYASMNGDISDLNQENLVIIDENDLVISNNMKSGSDCINKINGKVDLIIDDFEHSSLRNCGNFSDQDIAANKEYKAAIAASGMLTTCEALTQTPDNVASKMEILSKKLNHEISHIDVDTKYKDEFNYVKYVLEISGLTSNESISAWHSKDTPVDPSLYEEMENDPDFCANKGCHILHNVWTHMSKSLCLRSKVGQKIDDHITRDLSKSDGWFNVKLYGEDVGLEVEDMIFHDLLVEIMWDLACL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00685 622 PANTHER PROTEIN TRM32 469 546 IPR044257 -
Trre8g00685 622 Pfam Domain of unknown function (DUF4378) 502 542 IPR025486 -
Trre8g00685 622 Pfam Domain of unknown function (DUF4378) 549 614 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00685 Trre-Chr8 4896101 4898879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00685 156 608 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 24.094 4.53e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00685 - - mtr:25491599 790.415