Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00663 ATGGTTCTTCCTTCTCATAATTCATTTCACCATTGTTGTCAGATTCTACTTGCTCTTCTGCTTTTCAGTTTGCAGATATTAACTCATCACATCCAAGCTTATGGCTCAAAGGTTGAAGTGCTTCCTGGTTTTCAAGGGCCTCTTCCTTTTGAGCTTGAAACAGGGTATGTGGGATTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTCTCAAATAGGTCCATTTGAATTTGAAAACAAGGAGTACGACGGGAGAGTGCCTAGTTTGGTCTCGAGGCCACAATCATGGTCAAAGCTATGCAACATTATATTCGCAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGCGATTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACGTTGGTGGTGATTCATACTCTGGAATTCCTGTCCCGGCCATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATATGCTAGGGAACCCCGTCACAACACGCAGAGAAGATAACGATAAAATCCAATATGCTCATGGAATGGGACTCATTTCTGATGAACTCTATGCGTCGCTGCAGAAAAATTGTAAAGGAGAATATATTGATGTAGATTCCAGAAATGAATTGTGTTTAAGAGATCTTCAGTACTTTGATGAGTGCCTTTCAAGAATTGATAAGTACTTCATTTTGGATCCCTATTGCAAAGATGATTCGCCACTCTGGAGGAGATCATTGACTCAAGAGTTGAAGGAATCTCTTAGTTCTCGTCTCACAGCGCCCGGATTAAGCTGCCGAACTTATGAATTTTACCTCACCACTAAATGGGCTAACGATGAGCGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAAGGAAATGGACACGATGTTACAGGACTGATTTTGAGTATGAGATCGTTAGTAGCTTCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGCTCTTTGATATACAATGGGGATCATGATTCAGTGGTTCCTTTCATGTCTACTCAAGCTTGGATAAGAGCTCTAAACTACTCCGTTGTTGATGATTGGAGACCATGGTTTGTAGATGGCCAAGTGGGAGGATATACAAGGACTTACTCGAATCAAATGACATTTGCAATTGTGAAGGGTTCAGGACATACAGCTCCTGACTATACTCCAGAGCAATGTTTTGCAATGTTCACTAAGTGGATATCTAAGCTGCCTTTGTAA 1407 0.4065 MVLPSHNSFHHCCQILLALLLFSLQILTHHIQAYGSKVEVLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVSQIGPFEFENKEYDGRVPSLVSRPQSWSKLCNIIFADLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHPEFLSNEFYVGGDSYSGIPVPAIVQEISNGNEKGLQPLINLQGYMLGNPVTTRREDNDKIQYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQYFDECLSRIDKYFILDPYCKDDSPLWRRSLTQELKESLSSRLTAPGLSCRTYEFYLTTKWANDERVRKALHIREGTIRKWTRCYRTDFEYEIVSSFEFHANLSKKGYRSLIYNGDHDSVVPFMSTQAWIRALNYSVVDDWRPWFVDGQVGGYTRTYSNQMTFAIVKGSGHTAPDYTPEQCFAMFTKWISKLPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00663 468 SUPERFAMILY alpha/beta-Hydrolases 41 467 IPR029058 -
Trre8g00663 468 Gene3D alpha/beta hydrolase 38 467 IPR029058 -
Trre8g00663 468 FunFam Carboxypeptidase 371 465 - -
Trre8g00663 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Trre8g00663 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Trre8g00663 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Trre8g00663 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Trre8g00663 468 Pfam Serine carboxypeptidase 42 464 IPR001563 GO:0004185|GO:0006508
Trre8g00663 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 452 IPR001563 GO:0004185|GO:0006508
Trre8g00663 468 FunFam Serine carboxypeptidase-like 11 32 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00663 Trre-Chr8 4713516 4718170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00663 29 61 Calmodulin-binding Proteins AT2G22960 63.636 2.22e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00663 K16296 - tpra:123922058 815.453