Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00662 ATGATGGTTCTTCCTTCTCATAATTCATTTCACCATTGTTGTCAGATTCTACTTGCTCTTCTGCTTTTCAGTTTGCAGATATTAACTCATCACATCCAAGCTTATGGCTCAAAGGTTGAAGTGCTTCCTGGTTTTCAAGGGCCTCTTCCTTTTGAGCTTGAAACAGGGTATGTGGGATTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTCTCAAATAGGTCCATTTGAATTTGAAAACAAGGAGTACGACGGGAGAGTGCCTAGTTTGGTCTCGAGGCCACAATCATGGTCAAAGCTATGCAACATTATATTCGCAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGCGATTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACGTTGGTGGTGATTCATACTCTGGAATTCCTGTCCCGGCCATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATATGCTAGGGAACCCCGTCACAACACGCAGAGAAGATAACGATAAAATCCAATATGCTCATGGAATGGGACTCATTTCTGATGAACTCTATGCGTCGCTGCAGAAAAATTGTAAAGGAGAATATATTGATGTAGATTCCAGAAATGAATTGTGTTTAAGAGATCTTCAGTACTTTGATGAGTGCCTTTCAAGAATTGATAAGTACTTCATTTTGGATCCCTATTGCAAAGATGATTCGCCACTCTGGAGGAGATCATTGACTCAAGAGTTGAAGGAATCTCTTAGTTCTCGTCTCACAGCGCCCGGATTAAGCTGCCGAACTTATGAATTTTACCTCACCACTAAATGGGCTAACGATGAGCGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAAGGAAATGGACACGATGTTACAGGACTGATTTTGAGTATGAGATCGTTAGTAGCTTCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGCTCTTTGATATACAATGGGGATCATGATTCAGTGGTTCCTTTCATGTCTACTCAAGCTTGGATAAGAGCTCTAAACTACTCCGTTGTTGATGATTGGAGACCATGGTTTGTAGATGGCCAAGTGGGAGGATATACAAGGACTTACTCGAATCAAATGACATTTGCAATTGTGAAGGGTTCAGGACATACAGCTCCTGACTATACTCCAGAGCAATGTTTTGCAATGTTCACTAAGTGGATATCTAAGCTGCCTTTGTAA 1410 0.4064 MMVLPSHNSFHHCCQILLALLLFSLQILTHHIQAYGSKVEVLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVSQIGPFEFENKEYDGRVPSLVSRPQSWSKLCNIIFADLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHPEFLSNEFYVGGDSYSGIPVPAIVQEISNGNEKGLQPLINLQGYMLGNPVTTRREDNDKIQYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQYFDECLSRIDKYFILDPYCKDDSPLWRRSLTQELKESLSSRLTAPGLSCRTYEFYLTTKWANDERVRKALHIREGTIRKWTRCYRTDFEYEIVSSFEFHANLSKKGYRSLIYNGDHDSVVPFMSTQAWIRALNYSVVDDWRPWFVDGQVGGYTRTYSNQMTFAIVKGSGHTAPDYTPEQCFAMFTKWISKLPL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00662 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 453 IPR001563 GO:0004185|GO:0006508
Trre8g00662 469 Pfam Serine carboxypeptidase 43 465 IPR001563 GO:0004185|GO:0006508
Trre8g00662 469 FunFam Serine carboxypeptidase-like 11 33 469 - -
Trre8g00662 469 SUPERFAMILY alpha/beta-Hydrolases 42 468 IPR029058 -
Trre8g00662 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Trre8g00662 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Trre8g00662 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Trre8g00662 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Trre8g00662 469 FunFam Carboxypeptidase 324 468 - -
Trre8g00662 469 Gene3D alpha/beta hydrolase 39 468 IPR029058 -
Trre8g00662 469 FunFam Carboxypeptidase 372 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00662 Trre-Chr8 4713513 4718170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00662 30 62 Calmodulin-binding Proteins AT2G22960 63.636 2.06e-07 49.3