Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00661 ATGAACATGATGGTTCCTCATTCTCATAATTCATTTCACCATTGTTGTCAGATTCTACTTGCTCTTCTGCTTTTCAGTTTTCAGATATTAACTCATCATATCCAAGCTTATGCCTCAAAGGTTGAAGTGCTTCCTGGTTTTCAAGGGCCTCTTCCTTTTGAGCTTGAAACAGGGTACGTGGGTTTAGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTATCAAATTGGTCCAGTTCAATTAGAAATCAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTCTTGAGGCCACAGTCATGGACAAAGTTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATCTCACTGCTCACCGAAGCGATTGGAAAATAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACACTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCTGGCATTCCTGTCCCGGCGATTCTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATCTGCTTGGGAATCCCATGACAACATACAGAGAACCTAATGATCAAATCCCATATGCTCATGGAATGGGACTCATTTCGGATGAACTTTATGCGTCATTGCAGAAAAATTGTAAAGGAGAATATATTGATGTAGATTCAAGAAATGAGTTGTGTTTAAGAGATCTTCAGTTCTTTGATGAGTGCCTTTCAGGAATTAATAAGTTCCACATTTTGGATCGCTATTGTGAAGATAATTCGCATCTTTGGAGGAGATCATTGACTCAGGAGTTGAAGAAATCTTATAGTTCTCATCTCACAGTTCCTGAATTAAGCTGCCAAATTTATGGATTTTACCTTGCCACTAAATGGGCTAACGATGAGCGTGTACGCAAGGCACTGCATATTCGAGAGGGAACCATACGGAAATGGGAACGTTGTTACACTACTGATTTTGAGCATGAGATATTTAGTAGTGTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTTGATGATTGGAGGCCTTGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACACTCCAGAGCAATGTTTTGCCATGTTCACTAAGTGGATATCTAAGTTGCCTTTGTAA 1416 0.3962 MNMMVPHSHNSFHHCCQILLALLLFSFQILTHHIQAYASKVEVLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVYQIGPVQLEIKEYDGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKIVHHAHQFLRKWLIDHTEFLSNEFYIGADSYSGIPVPAILQEISNGNEKGLQPLINLQGYLLGNPMTTYREPNDQIPYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQFFDECLSGINKFHILDRYCEDNSHLWRRSLTQELKKSYSSHLTVPELSCQIYGFYLATKWANDERVRKALHIREGTIRKWERCYTTDFEHEIFSSVEFHANLSKKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHTAPEYTPEQCFAMFTKWISKLPL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00661 471 Gene3D alpha/beta hydrolase 37 470 IPR029058 -
Trre8g00661 471 Pfam Serine carboxypeptidase 45 467 IPR001563 GO:0004185|GO:0006508
Trre8g00661 471 FunFam Serine carboxypeptidase-like 11 35 471 - -
Trre8g00661 471 FunFam Carboxypeptidase 326 470 - -
Trre8g00661 471 SUPERFAMILY alpha/beta-Hydrolases 44 470 IPR029058 -
Trre8g00661 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 455 IPR001563 GO:0004185|GO:0006508
Trre8g00661 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Trre8g00661 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Trre8g00661 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Trre8g00661 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Trre8g00661 471 FunFam Carboxypeptidase 374 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00661 Trre-Chr8 4705111 4712300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00661 32 64 Calmodulin-binding Proteins AT2G22960 60.606 1.14e-06 47.4