Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00660 ATGAACATAATGGTTCCTCCTTCTCATAGCTCACTTTACTATTCTTTTCAAATTCTACTTGCTCTTGTGCTTTTTATTTTGCAGATGGTAACTCACCAGCTGGAAGCTTCTAGCTCAAAGGTTGAAGTGCTTCCTGGTTTTGAAGGGACTCTTCCTTTTCAACTTGAAACAGGGTATGTGGGATTGGGAGAAACAGATGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGACAATAATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACCGGTGGTCCTGGTTGTTCTTCTTTTTCCGGCCTTGTCTATCAAATTGGCCCCGTTGAATTCGAAATCAAGGAGTACAACGGCAGCGTGCCTAGTTTGGTCTTGAGGCCACAATCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGCGACTGGAAATTAGTTCACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGAGCACCCTGAATTTATTTCAAATGAATTCTACTTTGGTGCTGATTCATACTCCGGCATTCCTGTCCCGGCCATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGTCTTCAGCCATTGATAAATCTTCAGGGATATCTGCTAGGGAACCCGATAACAACACGAAGAGAAAAAAATTATCAAATCCCATATGCTCATGGAATGGGACTCATCTCTGATGAACTCTATGCATCACTGCAGAAAAATTGTAAAGGAGAGTATATTGACGTCGATTCCCGAAATGAGTTGTGTTTAAGAGATCTCCAGTCATTTGATGAGAACCTTTCAGGAATTAATCAGTTCTACATTTTGGATAGCTATTGCGAAAACGATACACCACTCTGGAGGAGATCATTGACTCATGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTGCCTGAATTAAGCTGCCGAATTTATAGTTCTTACCTCGGTGTTAAGTGGATTAACGATGAGCGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAGGGAAATGGGTACGTTGTTACAAGACTGATTTTGAGTATGAGATCTTTGATAGCACCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGCTCTTTGATATACAGCGGAGATCATGACATAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGATCTAAACTACTCCATTGTAGATGATTGGAGGCCTTGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGGGTTCGGGAGATATGGCTCCCGAGTACACTCCCGAGCAATGTTTTTCCATGTTGACTAAGTGGATATCTAATTTGCCTTTGTAA 1419 0.4066 MNIMVPPSHSSLYYSFQILLALVLFILQMVTHQLEASSSKVEVLPGFEGTLPFQLETGYVGLGETDDDDMQVFYYFIKSDNNPKKDPLMLWLTGGPGCSSFSGLVYQIGPVEFEIKEYNGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHTHQFLRKWLIEHPEFISNEFYFGADSYSGIPVPAIVQEISNGNEEGLQPLINLQGYLLGNPITTRREKNYQIPYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQSFDENLSGINQFYILDSYCENDTPLWRRSLTHELKKSSSSHLTVPELSCRIYSSYLGVKWINDERVRKALHIREGTIGKWVRCYKTDFEYEIFDSTEFHANLSKKGYRSLIYSGDHDIVVPFMSTQAWIRDLNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGDMAPEYTPEQCFSMLTKWISNLPL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00660 472 FunFam Serine carboxypeptidase-like 11 35 472 - -
Trre8g00660 472 SUPERFAMILY alpha/beta-Hydrolases 44 471 IPR029058 -
Trre8g00660 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 456 IPR001563 GO:0004185|GO:0006508
Trre8g00660 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Trre8g00660 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Trre8g00660 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Trre8g00660 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Trre8g00660 472 FunFam Carboxypeptidase 327 471 - -
Trre8g00660 472 FunFam Carboxypeptidase 375 469 - -
Trre8g00660 472 Gene3D alpha/beta hydrolase 31 471 IPR029058 -
Trre8g00660 472 Pfam Serine carboxypeptidase 45 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00660 Trre-Chr8 4698400 4703379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00660 32 72 Calmodulin-binding Proteins AT2G22960 53.659 5.32e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00660 K16296 - tpra:123922058 904.434