Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00659 ATGAAGAACATGATGGTTCCTCGTTCTCATAGTTCACTCTACTATTGTTTTCAGATTCTACTTGCTCTTGTGCTTCTTAGTTTGCAGCTGGAAGCTTCTAGCTCAAAGGTTGAAGTGCTTCCTGGTTTTCAAGGGCCTCTTCCTTTTCAACTTGAAACAGGGTATGTGGGATTGGGGGAAACAAACGATGACATGCAAGTATTCTATTACTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGATGTTCTTCCTTTTCTGGCCTTGTCTATGAAATAGGCCCAATTGCATTTGAAATCAAGGAGTACGACGTGAGCGTGCCTAGTTTGGTCTCGAGGCCACAGTCCTGGACAAAGTTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGGGAACATTTTCGTCTTGGCTGATTGATCACTCTGAATTTCTTTCAAATGAATTCTACATTGGAGGTGATTCATACTCTGGCATTCATGTTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGTCTTCAACCATCGATAAATCTTCAGGGATATCTGCTAGGGAACCCCATAACAACACGAAGAGAAAAAAATGATCGAATCCCATATGCTCATGGAATGGGACTCATCTCTGATGAACTTAATTTTTTTTATAATGACTTGTGTTTAAGAGATCTCCGGTCCTATGATCAGAGCCTTTCAAGAATTGATAAATTCAACATTTTGGATGGATTTTGTGAAGAGGATTCACTTCAATGGAGGCGATCATTGACTCAGGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTTCCCGAATTAAGCTGCCATTTTTATAATTCTTACCTCACCACTATATGGGCTGACGATGAGCGTGTTCGCAAGGCGCTGCATATTCGCGAGGGAACCATAGGGAAATGGGTACGTTGTTACAAGACTGATTATGAGTATCAGATCTTTGATAGCACCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGGTCATTGATATACAGTGGAGATCATGACCTAGTCGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTTTTGATGATTGGAGGCCATGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATATGGCTCCTGATGACACTCCTGAGCAATGTTTTTCCATATTCACTAAGTGGATATCTAATTTGCCTTTGTAA 1377 0.4031 MKNMMVPRSHSSLYYCFQILLALVLLSLQLEASSSKVEVLPGFQGPLPFQLETGYVGLGETNDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVYEIGPIAFEIKEYDVSVPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKGTFSSWLIDHSEFLSNEFYIGGDSYSGIHVPAIVQEISNGNEEGLQPSINLQGYLLGNPITTRREKNDRIPYAHGMGLISDELNFFYNDLCLRDLRSYDQSLSRIDKFNILDGFCEEDSLQWRRSLTQELKKSSSSHLTVPELSCHFYNSYLTTIWADDERVRKALHIREGTIGKWVRCYKTDYEYQIFDSTEFHANLSKKGYRSLIYSGDHDLVVPFMSTQAWIRALNYSIFDDWRPWFVNGQVGGYTRTYSNQMTFATVKGSGHMAPDDTPEQCFSIFTKWISNLPL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00659 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 442 IPR001563 GO:0004185|GO:0006508
Trre8g00659 458 SUPERFAMILY alpha/beta-Hydrolases 40 457 IPR029058 -
Trre8g00659 458 FunFam Carboxypeptidase 313 457 - -
Trre8g00659 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Trre8g00659 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Trre8g00659 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Trre8g00659 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Trre8g00659 458 FunFam Serine carboxypeptidase-like 19 30 290 - -
Trre8g00659 458 Pfam Serine carboxypeptidase 41 455 IPR001563 GO:0004185|GO:0006508
Trre8g00659 458 Gene3D alpha/beta hydrolase 36 457 IPR029058 -
Trre8g00659 458 FunFam Carboxypeptidase 361 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00659 Trre-Chr8 4690989 4696342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00659 33 64 Calmodulin-binding Proteins AT2G22960 58.824 3.08e-06 45.8