Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00658 ATGAAGAACATGATGGTTCCTCGTTCTCATAGTTCACTCTACTATTGTTTTCAGATTCTACTTGCTCTTGTGCTTCTTAGTTTGCAGCTGGAAGCTTCTAGCTCAAAGGTTGAAGTGCTTCCTGGTTTTCAAGGGCCTCTTCCTTTTCAACTTGAAACAGGGTATGTGGGATTGGGGGAAACAAACGATGACATGCAAGTATTCTATTACTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGATGTTCTTCCTTTTCTGGCCTTGTCTATGAAATAGGCCCAATTGCATTTGAAATCAAGGAGTACGACGTGAGCGTGCCTAGTTTGGTCTCGAGGCCACAGTCCTGGACAAAGTTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGGGAACATTTTCGTCTTGGCTGATTGATCACTCTGAATTTCTTTCAAATGAATTCTACATTGGAGGTGATTCATACTCTGGCATTCATGTTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGTCTTCAACCATCGATAAATCTTCAGGGATATCTGCTAGGGAACCCCATAACAACACGAAGAGAAAAAAATGATCGAATCCCATATGCTCATGGAATGGGACTCATCTCTGATGAACTTAATTTTTTTTATAATGACTTGTGTTTAAGAGATCTCCGGTCCTATGATCAGGCAAAGGATTCACTTCAATGGAGGCGATCATTGACTCAGGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTTCCCGAATTAAGCTGCCATTTTTATAATTCTTACCTCACCACTATATGGGCTGACGATGAGCGTGTTCGCAAGGCGCTGCATATTCGCGAGGGAACCATAGGGAAATGGGTACGTTGTTACAAGACTGATTATGAGTATCAGATCTTTGATAGCACCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGGTCATTGATATACAGTGGAGATCATGACCTAGTCGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTTTTGATGATTGGAGGCCATGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATATGGCTCCTGATGACACTCCTGAGCAATGTTTTTCCATATTCACTAAGTGGATATCTAATTTGCCTTTGTAA 1332 0.4069 MKNMMVPRSHSSLYYCFQILLALVLLSLQLEASSSKVEVLPGFQGPLPFQLETGYVGLGETNDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVYEIGPIAFEIKEYDVSVPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKGTFSSWLIDHSEFLSNEFYIGGDSYSGIHVPAIVQEISNGNEEGLQPSINLQGYLLGNPITTRREKNDRIPYAHGMGLISDELNFFYNDLCLRDLRSYDQAKDSLQWRRSLTQELKKSSSSHLTVPELSCHFYNSYLTTIWADDERVRKALHIREGTIGKWVRCYKTDYEYQIFDSTEFHANLSKKGYRSLIYSGDHDLVVPFMSTQAWIRALNYSIFDDWRPWFVNGQVGGYTRTYSNQMTFATVKGSGHMAPDDTPEQCFSIFTKWISNLPL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00658 443 FunFam Carboxypeptidase 346 440 - -
Trre8g00658 443 SUPERFAMILY alpha/beta-Hydrolases 40 442 IPR029058 -
Trre8g00658 443 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 427 IPR001563 GO:0004185|GO:0006508
Trre8g00658 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 410 423 IPR001563 GO:0004185|GO:0006508
Trre8g00658 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Trre8g00658 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Trre8g00658 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Trre8g00658 443 FunFam Serine carboxypeptidase-like 19 30 304 - -
Trre8g00658 443 Pfam Serine carboxypeptidase 41 440 IPR001563 GO:0004185|GO:0006508
Trre8g00658 443 Gene3D alpha/beta hydrolase 36 442 IPR029058 -
Trre8g00658 443 FunFam Carboxypeptidase 298 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00658 Trre-Chr8 4690989 4696342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00658 33 64 Calmodulin-binding Proteins AT2G22960 58.824 2.79e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00658 K16296 - tpra:123922058 750.355