Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00625 ATGCATCTTCTTAGATCGTGTAGAGTTGATCAAGTGTATGCAATAAAAGAAATGGACGAAAGAGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCAATAGAAGATTTTGCTACACATTCAAAAGATGTAATTGCTTATTCTGGGAGATTGCCACTAGCACTTCAAGTCCTTGGATCCTATTTGTCTGACTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATAATCAAGTACAGAAGAAGCTAAAAGTAAGCTTCGATGGTTTAAAAGATGATACAGAGAAACAAATATTCCTTGATATAGCTTGTTTCTTTATTGGTAGAGATCAAAATGATGTCATACGAATATTAAATGGGTGTAGATATTTTGCTGATATTGGAATTAAAGTCCTTGTAGAGCGAAGCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAATGCATAATTTGTTAAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCGACAGATCCTGAGAAGCGCAGTAGGTTGTGGTGCCACGAGGAAGTATTTGATATATTAGCAAAGTGCAAGGTAATTACTAATCAGTGA 612 0.3611 MHLLRSCRVDQVYAIKEMDERESLELFSWHAFKQPSPIEDFATHSKDVIAYSGRLPLALQVLGSYLSDCEITEWQKVLEKLKCIPHNQVQKKLKVSFDGLKDDTEKQIFLDIACFFIGRDQNDVIRILNGCRYFADIGIKVLVERSLVTVDNRNKLRMHNLLRDMGRQIIYEESPTDPEKRSRLWCHEEVFDILAKCKVITNQ 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00625 203 SUPERFAMILY "Winged helix" DNA-binding domain 88 194 IPR036390 -
Trre8g00625 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 112 IPR027417 -
Trre8g00625 203 Gene3D - 17 101 IPR042197 -
Trre8g00625 203 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 194 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00625 Trre-Chr8 4527893 4528504 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00625 3 185 WRKY Transcription Factor Family AT5G45050 41.848 6.14e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00625 - - mtr:11411578 341.273