Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00623 ATGCATGATTTGTTGAGAGACATGGGAAGACATATAATTTATGAGGAATCACCATTTGATCCCGAGAAGCGTAGTAGGCTGTGGCGGCGTGAGGAAGTGTTTGATATATTATCAAAACATAAGGGAACAGAAGCTGTCAAGGGACTGACTTTGGAACTTCCAAGAAATAATACAGTTTGTCTGAATACCAAAGCATTTAAGAAGATGAATAAACTCAGATTGCTTCGACTTGCCGGAGTGCAGCTTAATGGAGATTTTAAATATCTTTCCGGAGAACTTAGGTGGTTGCACTGGCATGGATTTCCATCAACTTATGCACCTGCAGAATTTCAACAAGGAATTCTAGTTGCCATTACATTAAAATATAGTAATCTAAAACAAATATGGAAGAAGAGCCAGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCGGAATTTGACTGAAACCCCAGAATTTTCAGACATGCCTAATCTTGAAAAGCTAGTCCTCAAAGACTGTCCAAGTTTGTCTGCGGTCTCTCATACCATTGGATCTCTCGATAAGCTTCTTCTTATCAATTTGACAGACTGCACAGGTCTTCTGAAACTTCCGAGAAGCATCTATAGATTAAAATCTTTGGAAACTTTGATTCTTTCAGGGTGTTCCATGATTGACAAATTGGAGGAGGACTTAGAACAGTTAGAATCATTGACAACATTGATTGCGGATAAGACTGCCATAACAAAAGTTCCCTTTTCAATAGTAAGATCAAAAAGCATTGGATATATTTCTCTATGTGGCTTTAAAGGATTCTCATGTGATGTATTTCCTTCTCTCATTTTTTCTTGGATGTCACCATCAAATAATGTGATATCCCGAGTTCAGACATCGGTATCCCTGTCATCTCTTGGTAATTTCAAGGACCTTCTAAAGCTTCGAAGTCTTTGTGTGGAGTGTGGCTCACAACTACAACTAAATCAAGATGTAGCAAGAATTTTGGATATATTTAAAGCCACGGATAGTCATAAGTTTGAAGCAAGTACAAGTGCGACTACATCACAGATCTCTGATATGTATGCTTCTCCTTTAATTGGTGATTGCCTTGGTTTAGTTCACCTTACAAGGTCAAAGAATTACTCAAAATCTTTCTTAATTCAAATGGGAACGAAATGCCAAGTTTCAAATATTACTGAAGACGGTATTTTTCAGACTGCAGATGGGTCTTCGGGTTCGTTTATACCCCCCTCAAACAACAAATCTGATTGGCTTACCTTTAGTTGCAAAGGTTGTTCTGTAACATTTGATGTACCAACAATGAAGGGGAATAACCTGAAGAGTATGATGTTGTTGGTCACCTATTACTCTTCCCCAGACAACATAACATCAGAATGTTGCCAAGGTGCATTGATCATAAATTACACAAAGGCAACCATTCACGCCTATAAAAGAGATACACTAACCTCTTTTGGCCATGAGGATTGGCAGACCATAACATCAAATCTAGAACCTGGTAACAAAGTGGAGGTTATGGTTGTTTTTGGGGAAGGATTCATTGTAGAGAAGACAACACTATCTCTCTTATATGATGAACCAATCAACAAAGAAATGAAACACTGTAAGGCAGTACATGAGGAGGATGTTATTGTTTCCAGTGGCGGTAATGTTGATATTCCAGCAGACAACAATGTTACTGGTCCACAACAAGATGAAAATGAAAGTGAAGATGAGCACAGACATGCAATATGTAGAAAAAGGAAGAGAGGAGACACTACAAGGTTAAGAGAGTAG 1776 0.3801 MHDLLRDMGRHIIYEESPFDPEKRSRLWRREEVFDILSKHKGTEAVKGLTLELPRNNTVCLNTKAFKKMNKLRLLRLAGVQLNGDFKYLSGELRWLHWHGFPSTYAPAEFQQGILVAITLKYSNLKQIWKKSQMLENLKILNLSHSRNLTETPEFSDMPNLEKLVLKDCPSLSAVSHTIGSLDKLLLINLTDCTGLLKLPRSIYRLKSLETLILSGCSMIDKLEEDLEQLESLTTLIADKTAITKVPFSIVRSKSIGYISLCGFKGFSCDVFPSLIFSWMSPSNNVISRVQTSVSLSSLGNFKDLLKLRSLCVECGSQLQLNQDVARILDIFKATDSHKFEASTSATTSQISDMYASPLIGDCLGLVHLTRSKNYSKSFLIQMGTKCQVSNITEDGIFQTADGSSGSFIPPSNNKSDWLTFSCKGCSVTFDVPTMKGNNLKSMMLLVTYYSSPDNITSECCQGALIINYTKATIHAYKRDTLTSFGHEDWQTITSNLEPGNKVEVMVVFGEGFIVEKTTLSLLYDEPINKEMKHCKAVHEEDVIVSSGGNVDIPADNNVTGPQQDENESEDEHRHAICRKRKRGDTTRLRE 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00623 591 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 322 IPR044974 GO:0006952
Trre8g00623 591 MobiDBLite consensus disorder prediction 547 591 - -
Trre8g00623 591 Gene3D Ribonuclease Inhibitor 44 294 IPR032675 -
Trre8g00623 591 Coils Coil 220 240 - -
Trre8g00623 591 SUPERFAMILY L domain-like 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00623 Trre-Chr8 4511747 4514212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00623 1 250 WRKY Transcription Factor Family AT4G12020 35.338 3.57e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00623 - - mtr:11411578 842.802