Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00611 ATGATGATGCATATGAAGAAGCAAATGAAAATGCACATGTCTCTCTATTGGGGAAAAGATGCTATAGTACTTTTCTCTGGGTGGCCTAACCAAAGTGTTAGCATGTATTTCTTAGCTATCTTGTTTGTGTTTTTCCTTGGAATGGTTATTGAGATTTTGCCTAACAAACCTACCATCAAGCAAGGGACAAATTATATCAAGGGAGGGTTGATTCAAGCTACCATATTCTTCTTTCGTATTAGTTTCCATTACTTGGTGATGCTTGCTGTTATGTCTTTCAATATAGGAATTTTCATTGCTGCTGTTGCTGGTCATACCTTGGGATTCTTAGTCAAGCCTCATATTTTTGTTGCCAACAAAAAACAAAATCCCGAATCCTCCTTGGCTATTGATGAAATCTAG 402 0.3706 MMMHMKKQMKMHMSLYWGKDAIVLFSGWPNQSVSMYFLAILFVFFLGMVIEILPNKPTIKQGTNYIKGGLIQATIFFFRISFHYLVMLAVMSFNIGIFIAAVAGHTLGFLVKPHIFVANKKQNPESSLAIDEI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00611 133 Pfam Ctr copper transporter family 64 111 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre8g00611 133 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 116 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00611 Trre-Chr8 4404639 4405040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00611 11 111 Inorganic Solute Cotransporters AT5G59040 44.554 4.15e-27 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00611 K14686 - gmx:100808693 162.54