Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00609 ATGGAAATTGGCCAAGATTTGTCAAAAACTGTTTCAACATTTATATTACAAAAAATCTTGGCAAACGAAGAAGGATTGGATCACATTTGTACTACAGCAGAAAGATTTTTCGCCGTAGCAAGAGTGTTGAAAATGGTGCTAAGAAGTCTTGAGGAGAAATATTCCCCTCGTCTTCTAAAGCTCGTAATTTCGTGCTATTCTCGTTTATCTAATAATCACAGGGCTAGCATTGCATTAACGAGCTGTCTTCCAAACACGCTCATGGATGTCACTTTCATTAATTACATTTGTGAGGACCCAACAACATTGCAATGGATGGAGACTTTGCTTGAAAATATTAGGAGTAATCATGTTCTTTTAGAACAAGGTGGCGGAGGAGTCGAAAATTGA 390 0.3769 MEIGQDLSKTVSTFILQKILANEEGLDHICTTAERFFAVARVLKMVLRSLEEKYSPRLLKLVISCYSRLSNNHRASIALTSCLPNTLMDVTFINYICEDPTTLQWMETLLENIRSNHVLLEQGGGGVEN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00609 129 Pfam Cell differentiation family, Rcd1-like 1 113 - -
Trre8g00609 129 Gene3D - 1 118 IPR011989 -
Trre8g00609 129 PANTHER UNCHARACTERIZED 1 116 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00609 Trre-Chr8 4389374 4391062 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre8g00609 Rcd1 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00609 K12606 - mof:131164386 144.436