Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00608 ATGGCCAATTTTTCTCCTCAACCATTCTCAACAAAGAACGACGCATCATCTATAGCTCCTCTCGGTTCTTCTGCCCAACCTAGCACCACTATGGCAAACTTGAAACACCTTGTTGATGAACTTATCAATCCTGATCTGCGAGAAAATGCTCTTCATGTGCTCTCCAAGAGGAGGGATTTGTTTCACGAACTTGCCCCTTTAATTTATTGTGGAATACTGCTTGAAATAATTTCAATATATCCGACTCTTTCATCATTGGAACTTACTGATGCGCAGTCAGCTCGAGTGTGCAATGTTCTTGCACTACTTCAGGTGAGATGA 321 0.4206 MANFSPQPFSTKNDASSIAPLGSSAQPSTTMANLKHLVDELINPDLRENALHVLSKRRDLFHELAPLIYCGILLEIISIYPTLSSLELTDAQSARVCNVLALLQVR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00608 106 Pfam Cell differentiation family, Rcd1-like 37 104 - -
Trre8g00608 106 PANTHER UNCHARACTERIZED 28 105 IPR007216 GO:0006402|GO:0030014
Trre8g00608 106 Gene3D - 26 106 IPR011989 -
Trre8g00608 106 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00608 Trre-Chr8 4379379 4385087 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre8g00608 Rcd1 1.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00608 K12606 - gmx:100801266 96.2857