Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00603 ATGGCGAACCTGAATGAACTTGTTAATGAACTCATCATTCCCGATCTCCGAGAAAATGCTCTCCATGTGCTCTCCAAGAGGAGAGATCTGTATCACGAAATTGCCCCTTTGTTGTGGAATACTGCTTGTGTTGTTACAGTATTTTTACAGGAAATAATTTCAATATATCCGGCTGTTTCATCATCGGAACTTACTTCTGCACAGTCAATTCGAGTTGTCAATGTTCTTGCACTACTTCAGTGTTTGGCATCTCACCCTGAAACAAGGATGCCATTCCTCAATGCAAACATACCTCAATATTTCTATCCATTCCTTCGAACGACTAGCAAGTTACCACAATTTGAGTTCTTGAGGGTTGCTAGTCTTGGAGTCATTTGTGCCGTGGCGAAGGCTAACACAGAAGAAGCCATAAATTTTCTTCTTTCAAGCGAGGTAGTACCTCTATGTTTGAAGAGTATAGAAAACGGACAAATATTTGCAAAAACCGTTGCAATGTTTGTAGTACAAAAAGTTTTAGCAAATGACAACGGTTTAGAGTATATATGTTCTACAGCAGAGCGTTTTTTTGCTGTAGCAAAAGTGTTGGAAATGGTCTTAGGATGTCTTGTGGAACCACCTTCCCCTCGACTTTTAAAATATGTAATTTCATCTTATTCTCGTTTATCTCATAATCACAGGGCTGGCATTGCATTAGCGAGGTGCATTCCAAACACTCTCATGGATGCCACTTTCATTAATTACATCCGTGAAGACCCAGCAACACTGAATATGATGAACGTTTTGCAAGAAAATATGAGGAACAATCGGATTTCTTTAGAACAAGGTGGCAGGGGAGGCGAAGATACTAGTGGTCGTTAG 858 0.4009 MANLNELVNELIIPDLRENALHVLSKRRDLYHEIAPLLWNTACVVTVFLQEIISIYPAVSSSELTSAQSIRVVNVLALLQCLASHPETRMPFLNANIPQYFYPFLRTTSKLPQFEFLRVASLGVICAVAKANTEEAINFLLSSEVVPLCLKSIENGQIFAKTVAMFVVQKVLANDNGLEYICSTAERFFAVAKVLEMVLGCLVEPPSPRLLKYVISSYSRLSHNHRAGIALARCIPNTLMDATFINYIREDPATLNMMNVLQENMRNNRISLEQGGRGGEDTSGR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00603 285 PANTHER UNCHARACTERIZED 3 268 IPR007216 GO:0006402|GO:0030014
Trre8g00603 285 Gene3D - 2 270 IPR011989 -
Trre8g00603 285 FunFam Cell differentiation family, Rcd1-like containing protein 2 268 - -
Trre8g00603 285 Pfam Cell differentiation family, Rcd1-like 7 264 - -
Trre8g00603 285 SUPERFAMILY ARM repeat 15 219 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00603 Trre-Chr8 4363633 4369881 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre8g00603 Rcd1 4.7e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00603 K12606 - mof:131164386 303.908