Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00523 ATGATATCAATGGCTTTTCTTTTTTTCCTTTTTGTTTGTATTACGAGCAGAGTTCTTGTGGATGGACAAAGAGGGACAACAACAACAACTATTGGATATTATTGGACAACATGTCCCAAAGCGGAGTCCATTGTTATGTCGACAGTTGAGAATCATGTTAAAAATGATTCTACTTTGCCTCCAGCTTTGCTTAGGATGCATTTTCACGACTGCTTCGTCCAAGGTTGTGACGCATCTGTTCTTATTGACGGTCCCAACGCCGAGAAGACTGCAATTCCAAACCTCGGTTTAAGAGGTTATGAGGTCATTCATGATGCAAAGGAAAAACTTGAGATTGTGTGTCCAGGAGTTGTTTCTTGTGCTGATATTGTCGCCCTTGCTGCTCGTGATTCTGTTGTACTGAGTGGTGGACTGAGCTGGGATGTTCCTACTGGACGCAGAGATGGACGTGTGTCACAGGCTTCCGACGCTCGTGACTTGCCAAGGCCCAATGATTCGGTTGATGTTCAAAAACATAAGTTTGCAGTAAAAGGCCTTAATGAGCTTGATCTTGTCACCTTAGTTGGTGGACATACAATTGGTAGTACTGCATGTCGATTCTTTAGTTACCGATTGAATAACTTCACAGAAAATGGTACTGCTGACCCTTCGATCGACCCCTCATTTCTACCAAAATTACAAGCACTCTGCCCTCAACACAGTGATGCAAACAGAGTTGCATTGGATGATGGGAGTCAAAACAAATTTGACAAATCTTACTATGCTAATCTGAAAATGGGCCGTGGAATTCTTCAATCTGATCAAGCCTTATGGAATGATTCATCCACAAAGATGCTTGTACAGAGATATTTGGGTGCAAGAGGGTCGTTTGGATTAAGATTTAATGTTGAGTTTGGAAAGTCAATGGTGAAAATGAGCAATATTGGAGTGAAGAGTGGTGCTGATGGGGAAATCCGCAAGTTATGTTCAGCTTTCAACTAA 981 0.42 MISMAFLFFLFVCITSRVLVDGQRGTTTTTIGYYWTTCPKAESIVMSTVENHVKNDSTLPPALLRMHFHDCFVQGCDASVLIDGPNAEKTAIPNLGLRGYEVIHDAKEKLEIVCPGVVSCADIVALAARDSVVLSGGLSWDVPTGRRDGRVSQASDARDLPRPNDSVDVQKHKFAVKGLNELDLVTLVGGHTIGSTACRFFSYRLNNFTENGTADPSIDPSFLPKLQALCPQHSDANRVALDDGSQNKFDKSYYANLKMGRGILQSDQALWNDSSTKMLVQRYLGARGSFGLRFNVEFGKSMVKMSNIGVKSGADGEIRKLCSAFN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00523 326 FunFam Peroxidase 32 171 - -
Trre8g00523 326 CDD secretory_peroxidase 38 325 IPR033905 GO:0004601|GO:0042744
Trre8g00523 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Trre8g00523 326 SUPERFAMILY Heme-dependent peroxidases 31 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 FunFam Peroxidase 161 305 - -
Trre8g00523 326 PANTHER PEROXIDASE 25-RELATED 11 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 Pfam Peroxidase 46 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 Gene3D Peroxidase, domain 2 161 305 - -
Trre8g00523 326 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 MobiDBLite consensus disorder prediction 151 165 - -
Trre8g00523 326 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00523 326 MobiDBLite consensus disorder prediction 145 165 - -
Trre8g00523 326 Gene3D - 32 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00523 Trre-Chr8 3885565 3887013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00523 9 326 Peroxidase AT2G41480 60.125 3.98e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00523 K00430 - qsu:111999599 439.884