Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00475 ATGGCAACCAATTTGAACAATCTATTCAAAACTTCAATTCTAAATCACAAGACAAACCAAAAGAACAACCTTTTCACTACAACCACACAAAAAACCACAAGATTTCAAGTTACTATCAATGCAACATCCAATAAAAAAAGTGGTAAACAACTCATAGAATCTGGCACAATTAGAACAATTTTACCAAAAGATGCTTCCACAGCTATGAACTCAGAAGGATTCATTCTTCTTGATGTTAGACCAAATTGGGAGAGAGAAAAGGCACGTGTGAAAGGTTCATTGCATGTTCCAATGTTTGTTGAAGATAAGGATAATGGTCCTTTAACTTTGCTTAAGAAATGGGTTCATTTTGGTTACATTGGTGCTTGGACTGGTCAATATCTTACTACTTTCAACTCTGAATTTCTTAGTCAAGTGGAAAATGTTGTTCCTGGTAAAGATAGCAAGATTCTTGTTGCATGTGGAGAAGGATTAAGGTCACTAACAGCAACTTCAAAGCTGTATAATGGAGGATACAAAAATATCGGATGGTTAGTTGGAGGTTTTAATCGTTCACAAGACAATGATTTCTCAGAAATAGAAGGAAAAGAGAAATTGAAGTATGCTACAATTGGAGGAGCCTCTTACTTCTTCCTTCAATTGCTCATACTTTTGCAGACAGTGAGTAAATAG 672 0.3527 MATNLNNLFKTSILNHKTNQKNNLFTTTTQKTTRFQVTINATSNKKSGKQLIESGTIRTILPKDASTAMNSEGFILLDVRPNWEREKARVKGSLHVPMFVEDKDNGPLTLLKKWVHFGYIGAWTGQYLTTFNSEFLSQVENVVPGKDSKILVACGEGLRSLTATSKLYNGGYKNIGWLVGGFNRSQDNDFSEIEGKEKLKYATIGGASYFFLQLLILLQTVSK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00475 223 FunFam Rhodanese-like domain-containing protein 10 57 201 - -
Trre8g00475 223 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 55 184 IPR036873 -
Trre8g00475 223 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 222 IPR044614 -
Trre8g00475 223 Gene3D - 57 203 IPR036873 -
Trre8g00475 223 SMART rhod_4 60 191 IPR001763 -
Trre8g00475 223 Pfam Rhodanese-like domain 62 184 IPR001763 -
Trre8g00475 223 CDD RHOD 64 183 - -
Trre8g00475 223 ProSiteProfiles Rhodanese domain profile. 70 194 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00475 Trre-Chr8 3604216 3605395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00475 47 210 Sulfurtransferasese or Rhodanese AT3G08920 65.854 5.33e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00475 - - psat:127105992 346.28