Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00466 ATGGCAAAACAAGAAAAATCAAAACAAGGGTGTTTCACTAGTTTCATAAAAGTGCTTATTTGTGCTAGAAATGAAACTAGTCCACCAGTGTATCCATCTGAAAATGTTGAAGAAAAAGAACCAATTCAACACAAAAAAGATAAACTTTTTGATGATTCTATTACTACTACTCCTGGAGTAGTAGCAAGATTAATGGGTTTAGATTCACTTCCAAGCACCAAAAAGGTTGTTGTTAATGGAACAACCTTAGATTCTGTTCCAAGAAGTAAATCAGTTAACTTTGTTGATTATTTACTTGATTTTGATCAAAATATTACAAACCATCGTCGTGTGAAAACTTCAGCTTCTTTTAGAGAAGTTCCTTCATTTATTGAGAAGCAAAAAAATTACCTTTTTGTCCTTGATATTGATGATAAAAAGGGTAATAAGGTTCAAGAAGAAAATAGAGTTAACTTGAAGAAAAAGAACAAGGAAATTGTGAGAGTGAAGAAAGAAAGGAATCAAGGGAAGAACAAGAAAATTTCTAAGTTAAAAGATGAACCAAGAAGGGTTCCTTTTTCTTCTTCAAATTCTTCTAAGTATAAATCAAAAGTTAGAAATTATGAAGGTAAAGATTTTTCAAGTGTTTCACCAAGATGTAATAATTGTAGTTATTATGGTTATGGTGATGTTGGTTCAAGTTCAAGTTCATGTTCAATATCTTCATTGCCAAATAAGCATAAGAAAGAGTTTGTTGAGCCAAAAATGAGGAACAAGATGAAAAATAATGTGTCTCCAAAGAAGATTCAGACAGAACATAGCTTGGAAAATCTTAGTCCTGTTTCAGTTCTTGATGTCAATGATTATGCTTTTCTTTATGGAGCTGATTATTCAGGTACAAACACTTTGGCTTCAAAGTCAAAGAGGAAATCTAAATCTTTATTGCCAGTGACAGTGTCCTTGGATTTGGATGAAGATGTTAATGACAAAGCAAACAATAATAAAGGTTATTATGCCCACACTGACATCAACAGAGAAGCAGATTATTACTCAGACTTGATGTTGAAGCTTCGTATTTTGACAGAAGAAACTATAAATGAGACAGATTATACATCAAAGACTCAAAGCTTAGAGGAAATTGTTTTGGTTTTTGAACAATTAGTTTTTGATAATTTGTTACTTGAGCTCTTGAATGAACTTGTAGAATTTTCTTCTTAA 1197 0.3141 MAKQEKSKQGCFTSFIKVLICARNETSPPVYPSENVEEKEPIQHKKDKLFDDSITTTPGVVARLMGLDSLPSTKKVVVNGTTLDSVPRSKSVNFVDYLLDFDQNITNHRRVKTSASFREVPSFIEKQKNYLFVLDIDDKKGNKVQEENRVNLKKKNKEIVRVKKERNQGKNKKISKLKDEPRRVPFSSSNSSKYKSKVRNYEGKDFSSVSPRCNNCSYYGYGDVGSSSSSCSISSLPNKHKKEFVEPKMRNKMKNNVSPKKIQTEHSLENLSPVSVLDVNDYAFLYGADYSGTNTLASKSKRKSKSLLPVTVSLDLDEDVNDKANNNKGYYAHTDINREADYYSDLMLKLRILTEETINETDYTSKTQSLEEIVLVFEQLVFDNLLLELLNELVEFSS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00466 398 Coils Coil 152 180 - -
Trre8g00466 398 Pfam DUF761-associated sequence motif 56 74 IPR032795 -
Trre8g00466 398 PANTHER OS05G0128300 PROTEIN 1 397 - -
Trre8g00466 398 MobiDBLite consensus disorder prediction 163 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00466 Trre-Chr8 3509746 3512802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00466 1 394 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 24.893 2.40e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00466 - - tpra:123924863 625.55