Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00461 ATGGTAAATACTTCACTCACCATAAACCAAGGAGCACCTTCATTCAACTTTTTACCACTACCACCTTCCACTGTCATGAGAACAACATCAATTCCAGCAAATTTCAGTGACAACATAGAATTTCACTTCCTTCCTAAGTATAATGCCTCAAGATATTATGTGTATATGTACTTTGCTGAAATCCAGAAACTCGAGGCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGAAAGCTTTTAAATAATGATCCACTCATTCCTTTGTATCTTCAAAGCATGTATTATATATCAGTTATAGATGAAAATAAGTTGGAACTTTGGTTTAATAAGACTAGTAGATCAACTCTTCCACCACTTTTCAACGCGATCGAGATATATATGACAAAGGACTTCTTACAATCAGAAACATATCAAACGGACGTTGATGCTATCCTAAATGTGAAGTCAATTTATGAGATCAAGAGAAACTGGCAAGGAGATCCTTGTATTCCAGTGTCTTACTTGTGGAAAGGTCTAAACTGCAGCTATGCTGAATCTAATTCACCAAGGATCGTATGCTTGAACTTAACTTCAAGCGGTTTAATTGGAAATATAGCTCCTGCCATATCCAATCTGAAATCAATAGAATATTTAGATTTGTCAAATAACAGTTTGACCGGAGCTGTGCCTGATTTCCTATCTCAGCTGCGCTTCTTGCGAGTTCTAAACCTTGAAGGAAATCAATTATCAGGAGCAATTCCAATACAACTCCTCGTGCGTTCAGAGAATAGTACGCTCAAATCCAATTTTGGTGGAAATCCAAATCTTTGCACTTCAGGTTCATGTAACAAGATGAATAAGGTTGTAGTTCCATTAGTAGCATCACTTGGTGGTGCTTTCATGATATTAGCAGTAGCAATGATTTCTTTTCGCATATACTACAAGAGACACCAAGTTTCTCATCATGTGAGCAAGATGGGTGGTTATTCAAGAATAAAGCAGGAACTAGAGTCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAACCATTACCAGAAACTTTGAAAAGGTTGTGGGGAAAGGAGCATCTGGAACAGTCTATCATGGCTGGATTGATCATGATACTGAGGTAGCTGTCAAAATGTTATCTTCCGAATCAGTTCAAGGATATATGCAATTTCAAGCAGAGGCCAAACTTTTTGCCGTAGTTCATCATAAATACTTGACTGGTCTTATAGGTTACTGTGATGATGGCACCAACATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCCAAACACTTATCAGATAAAAGTGAACATATATTTGAGTTGGAATCAACGACTTCAAATTGCGGTGGATGCTGCAGAAGGATTGGAGTCGTTGCTGGAACGATAGGATACCTCGACCCCGAGTACAATAGATTAAGCAGGTTGAAAGAAAAAAGTGATGTTTTCAGTTTTGGAGTAGTTTTGCTTGAGATAATTACAGGACAACCTGCCATAACCAAAACTGAAGAGAAAATCCATATTATTGAATGGATTAGTTCTACGCGGCTCGAAAGAGAGGTAAAGGATATTGTGGATCCCAGATTAGAGGGAGAATTTGATATTAACTTTGCAACAAAAGCTTTGGATATTGCAATGGCTTGTGTAGCAAAAACTTCAATCAATAGGCCAACCATGAGGCAAGTAGTTATGGAACTGAAACAATGTTTGGAGAACAAGATCACTGATTTGTCTGACTCTGATTACACTCCTGAGAGTTTACCAGACACCTTTAATTCTGTATCTTTCGACAGAATTAGTGGCGAGAGCTCTCTAGCGAGGTAG 1824 0.3772 MVNTSLTINQGAPSFNFLPLPPSTVMRTTSIPANFSDNIEFHFLPKYNASRYYVYMYFAEIQKLEANQIREFNIFVNGKLLNNDPLIPLYLQSMYYISVIDENKLELWFNKTSRSTLPPLFNAIEIYMTKDFLQSETYQTDVDAILNVKSIYEIKRNWQGDPCIPVSYLWKGLNCSYAESNSPRIVCLNLTSSGLIGNIAPAISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLRVLNLEGNQLSGAIPIQLLVRSENSTLKSNFGGNPNLCTSGSCNKMNKVVVPLVASLGGAFMILAVAMISFRIYYKRHQVSHHVSKMGGYSRIKQELESKKQEFTYEEVLTITRNFEKVVGKGASGTVYHGWIDHDTEVAVKMLSSESVQGYMQFQAEAKLFAVVHHKYLTGLIGYCDDGTNMALIYEYMANGDLAKHLSDKSEHIFELESTTSNCGGCCRRIGVVAGTIGYLDPEYNRLSRLKEKSDVFSFGVVLLEIITGQPAITKTEEKIHIIEWISSTRLEREVKDIVDPRLEGEFDINFATKALDIAMACVAKTSINRPTMRQVVMELKQCLENKITDLSDSDYTPESLPDTFNSVSFDRISGESSLAR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00461 607 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Trre8g00461 607 Pfam Protein kinase domain 458 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00461 607 SUPERFAMILY Protein kinase-like (PK-like) 333 574 IPR011009 -
Trre8g00461 607 Gene3D Phosphorylase Kinase; domain 1 328 422 - -
Trre8g00461 607 ProSiteProfiles Protein kinase domain profile. 233 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00461 607 SUPERFAMILY L domain-like 145 270 - -
Trre8g00461 607 Pfam Protein tyrosine and serine/threonine kinase 349 447 IPR001245 GO:0004672|GO:0006468
Trre8g00461 607 Gene3D Ribonuclease Inhibitor 142 264 IPR032675 -
Trre8g00461 607 Pfam Leucine rich repeat 188 243 IPR001611 GO:0005515
Trre8g00461 607 Pfam Malectin-like domain 17 128 IPR024788 -
Trre8g00461 607 PANTHER OS07G0107800 PROTEIN-RELATED 3 571 - -
Trre8g00461 607 FunFam Leucine-rich repeat receptor-like kinase 140 273 - -
Trre8g00461 607 Gene3D Transferase(Phosphotransferase) domain 1 423 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00461 Trre-Chr8 3467190 3470785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00461 1 570 Receptor kinase-like Gene Family AT2G19210 43.038 1.04e-161 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre8g00461 Pkinase 2.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00461 - - psat:127087401 956.822